RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 PPLO60437 1756 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 QSOX1O00391 747 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 SLC31A1O15431 190 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 GRAP2O75791 330 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 COL6A1P12109 1028 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 GRK2P25098 689 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 BMPR1AP36894 532 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 OC90Q02509 493 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CUL4AQ13619 759 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 ARSJQ5FYB0 599 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-218ENST00000640036 ZNF618Q5T7W0 954 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 WDR49Q8IV35 697 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 FAM133AQ8N9E0 248 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 C2orf15Q8WU43 125 aaKnown RBP5.17□□□□□ -1.58
SCN1A-218ENST00000640036 PPP1R13LQ8WUF5 828 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CARD9Q9H257 536 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 DNAJC28Q9NX36 388 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 PSME2Q9UL46 239 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 FIS1Q9Y3D6 152 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 DTNAQ9Y4J8 743 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 COL1A1P02452 1464 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-218ENST00000640036 AKAP12Q02952 1782 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 IFNA16P05015 189 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 RARGP13631 454 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CCR3P51677 355 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CSE1LP55060 971 aaKnown RBP5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CNGA2Q16280 664 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 LAYNQ6UX15 382 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 FRMD5Q7Z6J6 570 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 DENND1CQ8IV53 801 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 C10orf53Q8N6V4 93 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 TMEM145Q8NBT3 493 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 PYROXD1Q8WU10 500 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 WDR60Q8WVS4 1066 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 MYLIPQ8WY64 445 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 SERAC1Q96JX3 654 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CEP19Q96LK0 163 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 PRPF18Q99633 342 aaKnown RBP5.17□□□□□ -1.58
SCN1A-218ENST00000640036 TMEM175Q9BSA9 504 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 SLC29A3Q9BZD2 475 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 LSG1Q9H089 658 aaKnown RBP5.17□□□□□ -1.58
SCN1A-218ENST00000640036 ARMC7Q9H6L4 198 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 PCDHGB3Q9Y5G1 929 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 SPAG17Q6Q759 2223 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 A0A1W2PQ67 120 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 GSAPA4D1B5 854 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 PITPNM1O00562 1244 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 TXNDC9O14530 226 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 GNGT2O14610 69 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 NUDT14O95848 222 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 GPC1P35052 558 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 NPTX2P47972 431 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 MASP1P48740 699 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 AP1S2P56377 157 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 PTK6Q13882 451 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 PDE1CQ14123 709 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-218ENST00000640036 INAQ16352 499 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 ZSCAN23Q3MJ62 389 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 GRASPQ7Z6J2 395 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-218ENST00000640036 RNF135Q8IUD6 432 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CERS5Q8N5B7 392 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 ZNF614Q8N883 585 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 BLOC1S5Q8TDH9 187 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 NXPE3Q969Y0 559 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 TMEM125Q96AQ2 219 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 PSMB7Q99436 277 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 ASPSCR1Q9BZE9 553 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 NDST4Q9H3R1 872 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CLIC4Q9Y696 253 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 ABCC6O95255 1503 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 PLA2G6O60733 806 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CER1O95813 267 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 GPD1P21695 349 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 NEK2P51955 445 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 BLVRAP53004 296 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CAP1Q01518 475 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 RBBP7Q16576 425 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 NDUFA9Q16795 377 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 MRNIPQ6NTE8 343 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 C16orf62Q7Z3J2 963 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 HID1Q8IV36 788 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 KIAA0319LQ8IZA0 1049 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 OXR1Q8N573 874 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CCDC33Q8N5R6 958 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 IPMKQ8NFU5 416 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 CEP70Q8NHQ1 597 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 RHBDD1Q8TEB9 315 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 IARS2Q9NSE4 1012 aaKnown RBP5.17□□□□□ -1.58
SCN1A-218ENST00000640036 UBA2Q9UBT2 640 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-218ENST00000640036 TRAF3IP3Q9Y228 551 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 COLEC10Q9Y6Z7 277 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 BRWD1Q9NSI6 2320 aa5.17□□□□□ -1.58
SCN1A-218ENST00000640036 H3BUI4 141 aa5.16□□□□□ -1.58
SCN1A-218ENST00000640036 CASKO14936 926 aa5.16□□□□□ -1.58
SCN1A-218ENST00000640036 GUCY1B2O75343 617 aa5.16□□□□□ -1.58
SCN1A-218ENST00000640036 VPS4BO75351 444 aa5.16□□□□□ -1.58
SCN1A-218ENST00000640036 ASLP04424 464 aa5.16□□□□□ -1.58
SCN1A-218ENST00000640036 ACAT1P24752 427 aaKnown RBP5.16□□□□□ -1.58
SCN1A-218ENST00000640036 PTGER2P43116 358 aa5.16□□□□□ -1.58
SCN1A-218ENST00000640036 CENPUQ71F23 418 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms