RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 ST6GALNAC1Q9NSC7 600 aaPredicted RBP0.29□□□□□ -2.36
CCDC7-215ENST00000639629 GNL3LQ9NVN8 582 aaKnown RBP0.29□□□□□ -2.36
CCDC7-215ENST00000639629 ZDHHC7Q9NXF8 308 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 BTG4Q9NY30 223 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 STK32BQ9NY57 414 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 USP35Q9P2H5 1018 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 RAD54BQ9Y620 910 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 ANKRD17O75179 2603 aaKnown RBP0.29□□□□□ -2.36
CCDC7-215ENST00000639629 IGHV4-28A0A0C4DH34 117 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 CCDC154A6NI56 674 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 MBD3L5A6NJ08 208 aaPredicted RBP0.29□□□□□ -2.36
CCDC7-215ENST00000639629 SPRY1O43609 319 aaPredicted RBP0.29□□□□□ -2.36
CCDC7-215ENST00000639629 RPLP2P05387 115 aaKnown RBP0.29□□□□□ -2.36
CCDC7-215ENST00000639629 HNRNPCP07910 306 aaKnown RBP eCLIP0.29□□□□□ -2.36
CCDC7-215ENST00000639629 HNRNPA1P09651 372 aaKnown RBP eCLIP0.29□□□□□ -2.36
CCDC7-215ENST00000639629 NOVP48745 357 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 SP2Q02086 613 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 SPDYE7PQ495Y7 208 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 EFHC1Q5JVL4 640 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 CCNYL2Q5T2Q4 361 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 ANO7Q6IWH7 933 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 FAAP20Q6NZ36 180 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 CCDC129Q6ZRS4 1044 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 MIGA2Q7L4E1 593 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 TFAP2DQ7Z6R9 452 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 CHERPQ8IWX8 916 aaKnown RBP0.29□□□□□ -2.36
CCDC7-215ENST00000639629 NAGSQ8N159 534 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 MAGEB6Q8N7X4 407 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 FKBP10Q96AY3 582 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 HAPLN3Q96S86 360 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 ERVMER34-1Q9H9K5 563 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 HDAC9Q9UKV0 1011 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 SHOC2Q9UQ13 582 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 DNHD1Q96M86 4753 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 CGNL1Q0VF96 1302 aa0.29□□□□□ -2.36
CCDC7-215ENST00000639629 YTHDC2Q9H6S0 1430 aaKnown RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 A0A1W2PS18 150 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 WDR91A4D1P6 747 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 ZNF587BE7ETH6 402 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 FGF3P11487 239 aaPredicted RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 MCM2P49736 904 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 ROR2Q01974 943 aaKnown RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 CTBP1Q13363 440 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 PPIGQ13427 754 aaKnown RBP eCLIP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 RPE65Q16518 533 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 SUPT20HL1Q3ZLR7 823 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 C9orf57Q5W0N0 161 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 KAZNQ674X7 775 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 DMKNQ6E0U4 476 aaPredicted RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 MSANTD2Q6P1R3 559 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 PATL1Q86TB9 770 aaKnown RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 TSPAN33Q86UF1 283 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 TERB1Q8NA31 727 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 SLC44A5Q8NCS7 719 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 OR56A3Q8NH54 315 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 C1orf43Q9BWL3 253 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 NUAK2Q9H093 628 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 CSRNP2Q9H175 543 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 DMRT3Q9NQL9 472 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 ELOVL5Q9NYP7 299 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 DLGAP2Q9P1A6 1054 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 RCAN3Q9UKA8 241 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 USP18Q9UMW8 372 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 SPTBN4Q9H254 2564 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 HERC2O95714 4834 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 CBY3A6NI87 242 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 GOLIM4O00461 696 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 ORC4O43929 436 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 NEK2P51955 445 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 EEFSECP57772 596 aaKnown RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 CNGA2Q16280 664 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 PPP6R3Q5H9R7 873 aaPredicted RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 CERCAMQ5T4B2 595 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 RINLQ6ZS11 566 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 FAM57BQ71RH2 274 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 ARL14EPQ8N8R7 260 aaPredicted RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 SLC22A12Q96S37 553 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 FAM118BQ9BPY3 351 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 SPC25Q9HBM1 224 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 WFDC1Q9HC57 220 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 DNAJC28Q9NX36 388 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 USP25Q9UHP3 1055 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 TRHDEQ9UKU6 1024 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 DRG1Q9Y295 367 aaKnown RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 VPS13DQ5THJ4 4388 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 OTOGLQ3ZCN5 2332 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 SETXQ7Z333 2677 aaKnown RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 SLCO1B7G3V0H7 640 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 TULP2O00295 520 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 USP12O75317 370 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 WDR47O94967 919 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 CPEP16870 476 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 EGR1P18146 543 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 EPHA3P29320 983 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 KRTAP10-1P60331 282 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 TMPRSS15P98073 1019 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 DEUP1Q05D60 604 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 PIN1Q13526 163 aaPredicted RBP0.28□□□□□ -2.36
CCDC7-215ENST00000639629 PGM5Q15124 567 aa0.28□□□□□ -2.36
CCDC7-215ENST00000639629 DENND2CQ68D51 928 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms