RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SLC1A6P48664 564 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 RGS7P49802 495 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 SERPINB9P50453 376 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 OAZ1P54368 228 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 AQP4P55087 323 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 PEX6Q13608 980 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 CUL3Q13618 768 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 HNRNPDQ14103 355 aaKnown RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 CCDC14Q49A88 953 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 PPP6R3Q5H9R7 873 aaPredicted RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ATF7IP2Q5U623 682 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ACAD11Q709F0 780 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ILDR2Q71H61 639 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 MAVSQ7Z434 540 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ADGRG6Q86SQ4 1221 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 SNRNP25Q9BV90 132 aaKnown RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 PNPOQ9NVS9 261 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 ADAMTS5Q9UNA0 930 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 APOBEC2Q9Y235 224 aaKnown RBP11.28□□□□□ -0.6
SNIP1-204ENST00000638725 PCDHA11Q9Y5I1 949 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 NR2E3Q9Y5X4 410 aa11.28□□□□□ -0.6
SNIP1-204ENST00000638725 CCNT2O60583 730 aaKnown RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 PEX10O60683 326 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 TCF7P36402 384 aaPredicted RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 COPAP53621 1224 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 CRADDP78560 199 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 NBPF12Q5TAG4 269 aaPredicted RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 MAP1SQ66K74 1059 aaPredicted RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 SLC9A4Q6AI14 798 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 MARK2Q7KZI7 788 aaKnown RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 SESTD1Q86VW0 696 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 TRIM50Q86XT4 487 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 NIM1KQ8IY84 436 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 RTKN2Q8IZC4 609 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 ARHGAP18Q8N392 663 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 RNF217Q8TC41 542 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 PTPRHQ9HD43 1115 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 SORCS3Q9UPU3 1222 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 ANK1P16157 1881 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 INO80B-WBP1J3KQ70 363 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 TPP1O14773 563 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 OPHN1O60890 802 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 ALDOAP04075 364 aaKnown RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 PROZP22891 400 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 GMPRP36959 345 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 GRIA2P42262 883 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 PRKG1Q13976 671 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 PDK2Q15119 407 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 VWA5B1Q5TIE3 1220 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 IER5Q5VY09 327 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 TIFABQ6ZNK6 161 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 ST13P4Q8IZP2 240 aaPredicted RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 ZNF280CQ8ND82 737 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 NLRP4Q96MN2 994 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 CENPKQ9BS16 269 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 INO80BQ9C086 356 aaPredicted RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 CDT1Q9H211 546 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 RPF1Q9H9Y2 349 aaKnown RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 DMAP1Q9NPF5 467 aaPredicted RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 PIH1D1Q9NWS0 290 aaKnown RBP11.27□□□□□ -0.61
SNIP1-204ENST00000638725 ZDHHC7Q9NXF8 308 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 CDH22Q9UJ99 828 aa11.27□□□□□ -0.61
SNIP1-204ENST00000638725 PLIN3O60664 434 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 ZMPSTE24O75844 475 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 KLHL2O95198 593 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 ARRB2P32121 409 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 GBE1Q04446 702 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 SLC10A2Q12908 348 aaPredicted RBP11.26□□□□□ -0.61
SNIP1-204ENST00000638725 DLG1Q12959 904 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 MED21Q13503 144 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 PDE1CQ14123 709 aaPredicted RBP11.26□□□□□ -0.61
SNIP1-204ENST00000638725 PCLAFQ15004 111 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 TCHHL1Q5QJ38 904 aaPredicted RBP11.26□□□□□ -0.61
SNIP1-204ENST00000638725 PGM2L1Q6PCE3 622 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 GDPD5Q8WTR4 605 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 CCDC28BQ9BUN5 200 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 MAGEB5Q9BZ81 275 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 MOCS1Q9NZB8 636 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 BTBD7Q9P203 1132 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 LOC100653049A0A140TA62 436 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 WDR27A2RRH5 827 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 LACTBL1A8MY62 500 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 KRT34O76011 436 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 VDRP11473 427 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 UQCRBP14927 111 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 IDH3AP50213 366 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 TNFAIP1Q13829 316 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 BOLA3Q53S33 107 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 FAM160B1Q5W0V3 765 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 PDPK2PQ6A1A2 396 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 JADE1Q6IE81 842 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 CASC4Q6P4E1 433 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 TSHZ1Q6ZSZ6 1077 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 EEPD1Q7L9B9 569 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 HPS6Q86YV9 775 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 EGFL6Q8IUX8 553 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 C10orf107Q8IVU9 208 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 DEFB107AQ8IZN7 70 aa11.26□□□□□ -0.61
SNIP1-204ENST00000638725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms