RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 STXBP5Q5T5C0 1151 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 LINC00299Q6ZSB3 139 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 C1orf186Q6ZWK4 172 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 ENOSF1Q7L5Y1 443 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 SETD3Q86TU7 594 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 MCOLN2Q8IZK6 566 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 CALML6Q8TD86 181 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 DDX1Q92499 740 aaKnown RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 DHX38Q92620 1227 aaKnown RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 TANKQ92844 425 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 MED30Q96HR3 178 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 WRNIP1Q96S55 665 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 WDR83Q9BRX9 315 aaKnown RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 FRMD8Q9BZ67 464 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 CYP4F11Q9HBI6 524 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 MINPP1Q9UNW1 487 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 SLX4Q8IY92 1834 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 ZBTB5O15062 677 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 IREB2P48200 963 aaKnown RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 KPNA1P52294 538 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 CD300CQ08708 224 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 FLOT2Q14254 428 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 GPATCH4Q5T3I0 446 aaKnown RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 LRRC38Q5VT99 294 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 PPP2R2DQ66LE6 453 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 KRT80Q6KB66 452 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 C16orf89Q6UX73 402 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 FRMD7Q6ZUT3 714 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 PALM2Q8IXS6 379 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 CADM3Q8N126 398 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 NAT8LQ8N9F0 302 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 RNF169Q8NCN4 708 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 FBXO36Q8NEA4 188 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 FIZ1Q96SL8 496 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 PKP2Q99959 881 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 TUBA1CQ9BQE3 449 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 CAAP1Q9H8G2 361 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 CRNNQ9UBG3 495 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 SRP68Q9UHB9 627 aaKnown RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 PRELID1Q9Y255 219 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 C7orf72A4D263 438 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 NOTOA8MTQ0 251 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 GIPC1O14908 333 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 DYNC1LI2O43237 492 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 COX4I1P13073 169 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 ZNF543Q08ER8 600 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 DGKDQ16760 1214 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 ABCB5Q2M3G0 1257 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 MGAT5BQ3V5L5 792 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 FAAH2Q6GMR7 532 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 XKR5Q6UX68 686 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 CDHR3Q6ZTQ4 885 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 FAM178BQ8IXR5 827 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 ELMOD1Q8N336 334 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 SLC44A5Q8NCS7 719 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 HELQQ8TDG4 1101 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 CEP44Q9C0F1 390 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 TMEM206Q9H813 350 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 COPS7BQ9H9Q2 264 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 CXorf21Q9HAI6 301 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 MRPL47Q9HD33 250 aaKnown RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 IPO11Q9UI26 975 aaKnown RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 CDC14AQ9UNH5 594 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 ITM2BQ9Y287 266 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 AREL1O15033 823 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 GRIN3BO60391 1043 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 KRT37O76014 449 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 SNRPAP09012 282 aaKnown RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 ZSCAN5DPP0CG00 497 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 UNGP13051 313 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 EIF2AK2P19525 551 aaKnown RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 PROZP22891 400 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 TCEA1P23193 301 aaKnown RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 PEX3P56589 373 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 MRPS22P82650 360 aaKnown RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 MRPS5P82675 430 aaKnown RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 ENPEPQ07075 957 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 DMPKQ09013 629 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 NFX1Q12986 1120 aaKnown RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 IKBKEQ14164 716 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 PIGGQ5H8A4 983 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 FSCBQ5H9T9 825 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 AARS2Q5JTZ9 985 aaKnown RBP12.36□□□□□ -0.43
CAPN3-221ENST00000638141 LIN9Q5TKA1 542 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 IRAK1BP1Q5VVH5 260 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 SLX4IPQ5VYV7 408 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 PLA2G4FQ68DD2 849 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 C16orf46Q6P387 395 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 SLC47A2Q86VL8 602 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 SLC26A11Q86WA9 606 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 SLC15A4Q8N697 577 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 ATP2A3Q93084 1043 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 VCPIP1Q96JH7 1222 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 KREMEN1Q96MU8 473 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 ALPK1Q96QP1 1244 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 COL4A1P02462 1669 aa12.36□□□□□ -0.43
CAPN3-221ENST00000638141 A0A1W2PPW3 197 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 GPR25O00155 361 aa12.35□□□□□ -0.43
CAPN3-221ENST00000638141 BCAS2O75934 225 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-221ENST00000638141 MCF2P10911 925 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms