RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 FBXO6Q9NRD1 293 aaPredicted RBP8.13□□□□□ -1.11
CDKL5-211ENST00000637881 GDAP2Q9NXN4 497 aa8.13□□□□□ -1.11
CDKL5-211ENST00000637881 GGA3Q9NZ52 723 aa8.13□□□□□ -1.11
CDKL5-211ENST00000637881 GMIPQ9P107 970 aa8.13□□□□□ -1.11
CDKL5-211ENST00000637881 TNFRSF10DQ9UBN6 386 aa8.13□□□□□ -1.11
CDKL5-211ENST00000637881 HMGXB4Q9UGU5 601 aa8.13□□□□□ -1.11
CDKL5-211ENST00000637881 VANGL2Q9ULK5 521 aa8.13□□□□□ -1.11
CDKL5-211ENST00000637881 GNEQ9Y223 722 aaKnown RBP8.13□□□□□ -1.11
CDKL5-211ENST00000637881 CFL2Q9Y281 166 aa8.13□□□□□ -1.11
CDKL5-211ENST00000637881 PPME1Q9Y570 386 aa8.13□□□□□ -1.11
CDKL5-211ENST00000637881 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 LINC00854A0A1B0GVQ3 168 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 TRIM64A6NGJ6 449 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 LRRIQ4A6NIV6 560 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 C19orf67A6NJJ6 358 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 FAM155AB1AL88 458 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 H3BMQ9 156 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ENPP3O14638 875 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 GIPC1O14908 333 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 BET1O15155 118 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 SHOXO15266 292 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 TP73O15350 636 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 B3GALNT1O75752 331 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 SERPINA6P08185 405 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 KRT3P12035 628 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 CFL1P23528 166 aaKnown RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 POLR2BP30876 1174 aaKnown RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 PIK3CAP42336 1068 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 PHC1P78364 1004 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 FKBP3Q00688 224 aaKnown RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 TRPC3Q13507 836 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 MAPRE2Q15555 327 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 MAP1SQ66K74 1059 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ANKRD26P1Q6NSI1 321 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 LYSMD3Q7Z3D4 306 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ANKS1BQ7Z6G8 1248 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 CARM1Q86X55 608 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 TRIM59Q8IWR1 403 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ZFPM1Q8IX07 1006 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ZC3H3Q8IXZ2 948 aaKnown RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 COLGALT2Q8IYK4 626 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 SLC15A4Q8N697 577 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ASCC1Q8N9N2 400 aaKnown RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 GALNT6Q8NCL4 622 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 EPS8L1Q8TE68 723 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 DLG3Q92796 817 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 DCPSQ96C86 337 aaKnown RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 GIMAP5Q96F15 307 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 VMP1Q96GC9 406 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 PRR11Q96HE9 360 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 CLPTM1LQ96KA5 538 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 COG8Q96MW5 612 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 STRBPQ96SI9 672 aaKnown RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 MYL10Q9BUA6 226 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 FRMD8Q9BZ67 464 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 WNT8AQ9H1J5 351 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ZFYVE28Q9HCC9 887 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 HMG20AQ9NP66 347 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 MRGBPQ9NV56 204 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 PSMC3IPQ9P2W1 217 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 EBF1Q9UH73 591 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 TBK1Q9UHD2 729 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 AGO2Q9UKV8 859 aaKnown RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 HEMK1Q9Y5R4 338 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ZHX2Q9Y6X8 837 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 CYP2D7A0A087X1C5 515 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ARPC4-TTLL3A0A0A6YYG9 625 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ARHGAP42A6NI28 874 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 MINDY4BA8MYZ0 360 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 PSMD11O00231 422 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 DYNC1LI2O43237 492 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 FOXD2O60548 495 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 SPAG6O75602 509 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 CLPXO76031 633 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ARHGEF15O94989 841 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 MYCP01106 439 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 DHRS4L1P0CG22 281 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 MYL2P10916 166 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 FGFR1P11362 822 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ATF2P15336 505 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 KRT15P19012 456 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 TGM1P22735 817 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 CALML3P27482 149 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 GCAP28676 217 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 CSTF2P33240 577 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 CHKAP35790 457 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 BMPR1AP36894 532 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 GALCP54803 685 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 TPTEP56180 551 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 SRP54P61011 504 aaKnown RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 KRT17Q04695 432 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 TRAP1Q12931 704 aaKnown RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ITGADQ13349 1161 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 SIX1Q15475 284 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-211ENST00000637881 NPY5RQ15761 445 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 DUSP7Q16829 419 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 PPM1LQ5SGD2 360 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 ATAD3BQ5T9A4 648 aa8.12□□□□□ -1.11
CDKL5-211ENST00000637881 TMC5Q6UXY8 1006 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms