RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 TBX21Q9UL17 535 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 ZNF487B1APH4 448 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 TMEM63AO94886 807 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 ADRA1BP35368 520 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 LMAN1P49257 510 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 ATP1A2P50993 1020 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 MORF4L2Q15014 288 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 FAXCQ5TGI0 409 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 TRMT10CQ7L0Y3 403 aaKnown RBP22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 TP53INP2Q8IXH6 220 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 DCP1BQ8IZD4 617 aaKnown RBP22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 IRGQQ8WZA9 623 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 COLEC11Q9BWP8 271 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 SAYSD1Q9NPB0 183 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 SF3B1O75533 1304 aaKnown RBP eCLIP22.44■■□□□ 1.18
CHRNA7-228ENST00000637519 LAMA2P24043 3122 aaKnown RBP22.44■■□□□ 1.18
CHRNA7-228ENST00000637519 FGFR3P22607 806 aa22.44■■□□□ 1.18
CHRNA7-228ENST00000637519 YWHAGP61981 247 aaKnown RBP eCLIP22.44■■□□□ 1.18
CHRNA7-228ENST00000637519 TTC19Q6DKK2 380 aaPredicted RBP22.44■■□□□ 1.18
CHRNA7-228ENST00000637519 SCD5Q86SK9 330 aa22.44■■□□□ 1.18
CHRNA7-228ENST00000637519 CRISPLD1Q9H336 500 aa22.44■■□□□ 1.18
CHRNA7-228ENST00000637519 NMUR1Q9HB89 426 aa22.44■■□□□ 1.18
CHRNA7-228ENST00000637519 TMEM39AQ9NV64 488 aa22.44■■□□□ 1.18
CHRNA7-228ENST00000637519 FBXW11Q9UKB1 542 aa22.44■■□□□ 1.18
CHRNA7-228ENST00000637519 EEF2KO00418 725 aaKnown RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 MSI1O43347 362 aaKnown RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 CPB1P15086 417 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 ITGB8P26012 769 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 HPDP32754 393 aaPredicted RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 USP46P62068 366 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 MRPL58Q14197 206 aaKnown RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 ZNF280DQ6N043 979 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 FAM117BQ6P1L5 589 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 KCNT2Q6UVM3 1135 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 PRSS55Q6UWB4 352 aaPredicted RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 OSER1Q9NX31 292 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 SFMBT1Q9UHJ3 866 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 SLC27A5Q9Y2P5 690 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 FNDC1Q4ZHG4 1894 aaPredicted RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 TTC4O95801 387 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 EIF3BP55884 814 aaKnown RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 LONRF1Q17RB8 773 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 CAPN12Q6ZSI9 719 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 RFX8Q6ZV50 586 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 LRRC43Q8N309 656 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 NAT8LQ8N9F0 302 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 CCDC110Q8TBZ0 833 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 EXOC4Q96A65 974 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 PGAP3Q96FM1 320 aaPredicted RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 TOX2Q96NM4 488 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 MRPL9Q9BYD2 267 aaKnown RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 TKTL2Q9H0I9 626 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 NOVA2Q9UNW9 492 aaKnown RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 SHOC2Q9UQ13 582 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 MICAL3Q7RTP6 2002 aa22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 COL4A4P53420 1690 aaPredicted RBP22.43■■□□□ 1.18
CHRNA7-228ENST00000637519 A0A1W2PQH9 124 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 H3BRJ5 948 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 HOXA2O43364 376 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 MAGEA4P43358 317 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 LRRC26Q2I0M4 334 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 PPIL6Q8IXY8 311 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 LGMNQ99538 433 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 WDCPQ9H6R7 721 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 PCDHB5Q9Y5E4 795 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 MRPL42Q9Y6G3 142 aaKnown RBP22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 HMGB1P1B2RPK0 211 aaPredicted RBP22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 STIP1P31948 543 aaKnown RBP22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 NFE2Q16621 373 aaPredicted RBP22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 MSS51Q4VC12 460 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 FNBP1LQ5T0N5 605 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 PSTKQ8IV42 348 aaKnown RBP22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 CCDC13Q8IYE1 715 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 NTAN1Q96AB6 310 aa22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 PAWRQ96IZ0 340 aaKnown RBP22.42■■□□□ 1.18
CHRNA7-228ENST00000637519 MYO16Q9Y6X6 1858 aa22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 BCLAF3A2AJT9 711 aaKnown RBP22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 F5H423 210 aaPredicted RBP22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 VNN2O95498 520 aa22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 VAV1P15498 845 aa22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 NR1D1P20393 614 aa22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 DPYSQ14117 519 aa22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 RNF19BQ6ZMZ0 732 aa22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 ANKMY2Q8IV38 441 aa22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 CASP10Q92851 521 aa22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 RNF34Q969K3 372 aa22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 SLC9A7Q96T83 725 aa22.41■■□□□ 1.18
CHRNA7-228ENST00000637519 ADAM12O43184 909 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 ZFXP17010 805 aaPredicted RBP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 CXCR3P49682 368 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 SCAPQ12770 1279 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 PDIA2Q13087 525 aaKnown RBP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 SEMA3BQ13214 749 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 SLC45A4Q5BKX6 768 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 BTBD8Q5XKL5 378 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 ZBED8Q8IZ13 594 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 SCML4Q8N228 414 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 OLFM3Q96PB7 478 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 QKIQ96PU8 341 aaKnown RBP eCLIP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms