RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ID4P47928 161 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 ELF2Q15723 593 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 MEA1Q16626 185 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 TCP11X2Q5H9J9 407 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 MIIPQ5JXC2 388 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 FYB2Q5VWT5 728 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 MSANTD2Q6P1R3 559 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 TOGARAM2Q6ZUX3 1019 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 KBTBD6Q86V97 674 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 ENOX1Q8TC92 643 aaKnown RBP14.4□□□□□ -0.1
PNKP-228ENST00000637325 STK32AQ8WU08 396 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 SHC3Q92529 594 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 TRIM62Q9BVG3 475 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 SIX2Q9NPC8 291 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 INVSQ9Y283 1065 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 STARD13Q9Y3M8 1113 aa14.4□□□□□ -0.1
PNKP-228ENST00000637325 TCRBV21S2A2A0A5A6 115 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 FOXN3O00409 490 aaPredicted RBP14.39□□□□□ -0.11
PNKP-228ENST00000637325 DCLK1O15075 740 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 TSPAN3O60637 253 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 LRP3O75074 770 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 ADAM23O75077 832 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 MBD3O95983 291 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 PENKP01210 267 aaPredicted RBP14.39□□□□□ -0.11
PNKP-228ENST00000637325 HOXB2P14652 356 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 NTSR1P30989 418 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 KRT9P35527 623 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 RPL34P49207 117 aaKnown RBP14.39□□□□□ -0.11
PNKP-228ENST00000637325 TBX4P57082 545 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 RAPGEF1Q13905 1077 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 MPPE1Q53F39 396 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 EGFLAMQ63HQ2 1017 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 NUGGCQ68CJ6 796 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 C11orf74Q86VG3 221 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 RASSF3Q86WH2 238 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 UNC45BQ8IWX7 931 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 CHPFQ8IZ52 775 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 MDGA1Q8NFP4 955 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 UCMAQ8WVF2 138 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 HMGB4Q8WW32 186 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 LOXL4Q96JB6 756 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 NOX5Q96PH1 765 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 LSM14BQ9BX40 385 aaKnown RBP14.39□□□□□ -0.11
PNKP-228ENST00000637325 SLC4A5Q9BY07 1137 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 PDCL3Q9H2J4 239 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 ANO10Q9NW15 660 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 TAB2Q9NYJ8 693 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 FBXO10Q9UK96 956 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 CEP83Q9Y592 693 aa14.39□□□□□ -0.11
PNKP-228ENST00000637325 PRRT4C9JH25 899 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 E5RJQ4 531 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 LATS1O95835 1130 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 HNRNPLP14866 589 aaKnown RBP eCLIP14.38□□□□□ -0.11
PNKP-228ENST00000637325 SLC11A2P49281 568 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 SNX16P57768 344 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 BPIFB4P59827 614 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 ZNF445P59923 1031 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 LMNB2Q03252 620 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 PDCLQ13371 301 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 PLK5Q496M5 336 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 ADGRF1Q5T601 910 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 SMYD5Q6GMV2 418 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 RBM43Q6ZSC3 357 aaKnown RBP14.38□□□□□ -0.11
PNKP-228ENST00000637325 TMEM110Q86TL2 294 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 PASD1Q8IV76 773 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 FAM217AQ8IXS0 508 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 TMA16Q96EY4 203 aaKnown RBP14.38□□□□□ -0.11
PNKP-228ENST00000637325 ZC3H10Q96K80 434 aaKnown RBP14.38□□□□□ -0.11
PNKP-228ENST00000637325 SPACA7Q96KW9 195 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 SERPINB11Q96P15 392 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 DDX50Q9BQ39 737 aaKnown RBP14.38□□□□□ -0.11
PNKP-228ENST00000637325 ARRDC1-AS1Q9H2J1 176 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 PARD6AQ9NPB6 346 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 CYTH4Q9UIA0 394 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 AJAP1Q9UKB5 411 aaPredicted RBP14.38□□□□□ -0.11
PNKP-228ENST00000637325 PCDHGC3Q9UN70 934 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 NAALADL1Q9UQQ1 740 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 SLC27A6Q9Y2P4 619 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 DMXL1Q9Y485 3027 aa14.38□□□□□ -0.11
PNKP-228ENST00000637325 CKAP5Q14008 2032 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 PRR5-ARHGAP8B1AHC4 643 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 PAPSS1O43252 624 aaPredicted RBP14.37□□□□□ -0.11
PNKP-228ENST00000637325 MAP3K13O43283 966 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 EPN2O95208 641 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 CHRM1P11229 460 aaPredicted RBP14.37□□□□□ -0.11
PNKP-228ENST00000637325 ARHGAP8P85298 464 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 ARID5AQ03989 594 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 RING1Q06587 406 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 BYSLQ13895 437 aaKnown RBP14.37□□□□□ -0.11
PNKP-228ENST00000637325 DRAP1Q14919 205 aaPredicted RBP14.37□□□□□ -0.11
PNKP-228ENST00000637325 E2F5Q15329 346 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 STX1AQ16623 288 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 RSPO4Q2I0M5 234 aaPredicted RBP14.37□□□□□ -0.11
PNKP-228ENST00000637325 CCDC183Q5T5S1 534 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 KLHDC7AQ5VTJ3 777 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 ANKS1BQ7Z6G8 1248 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 SLC47A2Q86VL8 602 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 ANKRD20A12PQ8NF67 263 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 DQX1Q8TE96 717 aaKnown RBP14.37□□□□□ -0.11
PNKP-228ENST00000637325 PPP1R13BQ96KQ4 1090 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms