RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 PSTKQ8IV42 348 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 RNF139Q8WU17 664 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 C2orf15Q8WU43 125 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 AUTS2Q8WXX7 1259 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 CASP10Q92851 521 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 SLC9A7Q96T83 725 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 TRIM62Q9BVG3 475 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 FRMD8P1Q9BZ68 369 aaPredicted RBP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 ETNK2Q9NVF9 386 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 SFMBT1Q9UHJ3 866 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 FBXW11Q9UKB1 542 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 DRG1Q9Y295 367 aaKnown RBP10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 SNX10Q9Y5X0 201 aa10.37□□□□□ -0.75
CACNA1A-216ENST00000635742 FAM92AA1XBS5 289 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 FAM72CH0Y354 149 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 MCF2LO15068 1137 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 RBP3P10745 1247 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 ATF2P15336 505 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 SYN1P17600 705 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 TGM2P21980 687 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 AMPD1P23109 780 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 YWHAQP27348 245 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 GGCXP38435 758 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 CXCR3P49682 368 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 HTRA4P83105 476 aaPredicted RBP10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 SEMA3BQ13214 749 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 EIF4EBP2Q13542 120 aaPredicted RBP10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 FAM72AQ5TYM5 149 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 NCBP2-AS2Q69YL0 99 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 FAM72DQ6L9T8 149 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 GSTA5Q7RTV2 222 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 FAM72BQ86X60 149 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 GIPC2Q8TF65 315 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 P3H4Q92791 437 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 ART4Q93070 314 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 FBXO32Q969P5 355 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 SPATA17Q96L03 361 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 FMO2Q99518 471 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 SMOC2Q9H3U7 446 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 FBXO44Q9H4M3 255 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 ARHGEF4Q9NR80 690 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 FAM53CQ9NYF3 392 aa10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 RCOR3Q9P2K3 495 aaPredicted RBP10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 FEZ2Q9UHY8 353 aaPredicted RBP10.36□□□□□ -0.75
CACNA1A-216ENST00000635742 SGK1O00141 431 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 CREB3O43889 395 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 RTN3O95197 1032 aaPredicted RBP10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 SEC24AO95486 1093 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 F9P00740 461 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 DNAJB2P25686 324 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 HSPA9P38646 679 aaKnown RBP10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 ARL4AP40617 200 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 AIF1P55008 147 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 GBE1Q04446 702 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 FAM182AQ5T1J6 154 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 DDX53Q86TM3 631 aaKnown RBP10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 ZC3H18Q86VM9 953 aaKnown RBP10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 MON1AQ86VX9 555 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 UNC45BQ8IWX7 931 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 VPS52Q8N1B4 723 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 MREGQ8N565 214 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 LRRN4Q8WUT4 740 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 SNF8Q96H20 258 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 TKTL2Q9H0I9 626 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 WHRNQ9P202 907 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 AFF4Q9UHB7 1163 aaKnown RBP10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 HEY1Q9Y5J3 304 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 SLC38A8A6NNN8 435 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 H3BRJ5 948 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 MFSD11O43934 449 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 ABLIM3O94929 683 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 IFNB1P01574 187 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 URODP06132 367 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 GBP1P32455 592 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 ADCY8P40145 1251 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 ITGA8P53708 1063 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 NRLP54845 237 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 RPL10AP62906 217 aaKnown RBP10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 LMNB2Q03252 620 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 SLC10A2Q12908 348 aaPredicted RBP10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 TAF10Q12962 218 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 CALCOCO2Q13137 446 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 DPYSQ14117 519 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 IZUMO3Q5VZ72 239 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 MSANTD2Q6P1R3 559 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 PSRC1Q6PGN9 363 aaPredicted RBP10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 RHBDF2Q6PJF5 856 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 RFX8Q6ZV50 586 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 TMC3Q7Z5M5 1100 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 FIBCD1Q8N539 461 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 CCDC33Q8N5R6 958 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 CCDC89Q8N998 374 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 WDCPQ9H6R7 721 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 PCDH9Q9HC56 1237 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 ARHGEF38Q9NXL2 777 aa10.35□□□□□ -0.75
CACNA1A-216ENST00000635742 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
CACNA1A-216ENST00000635742 H7C0C1 242 aa10.34□□□□□ -0.75
CACNA1A-216ENST00000635742 EEF2KO00418 725 aaKnown RBP10.34□□□□□ -0.75
CACNA1A-216ENST00000635742 FGF18O76093 207 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms