RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	STC2	O76061	302 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	CYBB	P04839	570 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	HMBS	P08397	361 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	ENG	P17813	658 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	GABRG2	P18507	467 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	ITPKA	P23677	461 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	CORO1A	P31146	461 aa	Known RBP	10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	HOXD12	P35452	270 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	KIF11	P52732	1056 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	COG7	P83436	770 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	SHC2	P98077	582 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	EFEMP1	Q12805	493 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	EDRF1	Q3B7T1	1238 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	KIAA1324	Q6UXG2	1013 aa	Known RBP	10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	TOGARAM2	Q6ZUX3	1019 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	RABEPK	Q7Z6M1	372 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	HDDC3	Q8N4P3	179 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	FBXL13	Q8NEE6	735 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	CEP76	Q8TAP6	659 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	IPO4	Q8TEX9	1081 aa	Known RBP	10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	EEF2KMT	Q96G04	330 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	TMEM176A	Q96HP8	235 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	FAXDC2	Q96IV6	333 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	SLC32A1	Q9H598	525 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	RAB20	Q9NX57	234 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	CACNA2D2	Q9NY47	1150 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	PLK2	Q9NYY3	685 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	CLIC5	Q9NZA1	410 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	CYP8B1	Q9UNU6	501 aa		10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	MYO18A	Q92614	2054 aa	Known RBP	10.88	□□□□□ -0.67
UBE3A-223	ENST00000631247	FREM2	Q5SZK8	3169 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247		A0A1W2PQF6	199 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	PRRT4	C9JH25	899 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	GIPC1	O14908	333 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	GREM1	O60565	184 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	ZNF202	O95125	648 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	CEACAM1	P13688	526 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	NDUFV2	P19404	249 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	CSRP1	P21291	193 aa	Known RBP	10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	CHKA	P35790	457 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	YWHAG	P61981	247 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	GFPT1	Q06210	699 aa	Predicted RBP	10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	ZNF33A	Q06730	810 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	E2F5	Q15329	346 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	DUOXA1	Q1HG43	343 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	ZCWPW2	Q504Y3	356 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	SCD5	Q86SK9	330 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	RGL4	Q8IZJ4	473 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	DEFB119	Q8N690	84 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	DEFB124	Q8NES8	71 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	UCMA	Q8WVF2	138 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	HSPA12B	Q96MM6	686 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	ACOX2	Q99424	681 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	GOLPH3L	Q9H4A5	285 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	GDPD2	Q9HCC8	539 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	TMEM74B	Q9NUR3	256 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	HESX1	Q9UBX0	185 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	PILRB	Q9UKJ0	227 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	SLC6A14	Q9UN76	642 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	ZDHHC9	Q9Y397	364 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	RAD54B	Q9Y620	910 aa		10.87	□□□□□ -0.67
UBE3A-223	ENST00000631247	IGHV1OR15-9	A0A0B4J2B8	117 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	SLC12A8	A0AV02	714 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	GFRA2	O00451	464 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	CDX4	O14627	284 aa	Predicted RBP	10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	SYNCRIP	O60506	623 aa	Known RBP	10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	SMC2	O95347	1197 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	CD19	P15391	556 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	BCAT1	P54687	386 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	YWHAE	P62258	255 aa	Known RBP	10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	ARID5A	Q03989	594 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	PNOC	Q13519	176 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	GOLGA7B	Q2TAP0	167 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	SYCP2L	Q5T4T6	812 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	KIAA1211L	Q6NV74	962 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	SLC23A3	Q6PIS1	610 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247		Q6ZNB5	142 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	PIGZ	Q86VD9	579 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	SIX6OS1	Q8N1H7	587 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	TRIML1	Q8N9V2	468 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	SLC4A11	Q8NBS3	891 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	RNF139	Q8WU17	664 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	SEMA4D	Q92854	862 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	IPO9	Q96P70	1041 aa	Known RBP	10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	ARID3A	Q99856	593 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	GABRG3	Q99928	467 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	LRRC4	Q9HBW1	653 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	MARCH2	Q9P0N8	246 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	HOOK1	Q9UJC3	728 aa	Known RBP	10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	USP3	Q9Y6I4	520 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	STON1	Q9Y6Q2	735 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	IGF2R	P11717	2491 aa		10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	DSP	P15924	2871 aa	Known RBP	10.86	□□□□□ -0.67
UBE3A-223	ENST00000631247	NPC1	O15118	1278 aa		10.85	□□□□□ -0.67
UBE3A-223	ENST00000631247	SLC16A3	O15427	465 aa	Known RBP	10.85	□□□□□ -0.67
UBE3A-223	ENST00000631247	OPHN1	O60890	802 aa		10.85	□□□□□ -0.67
UBE3A-223	ENST00000631247	ZBED1	O96006	694 aa		10.85	□□□□□ -0.67
UBE3A-223	ENST00000631247	SYP	P08247	313 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms