RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 UBE2J1Q9Y385 318 aaPredicted RBP3.85□□□□□ -1.79
SRP54-214ENST00000630962 RASA4BC9J798 803 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 PRPF4O43172 522 aaKnown RBP eCLIP3.84□□□□□ -1.79
SRP54-214ENST00000630962 RASA4O43374 803 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 CA12O43570 354 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 PRC1O43663 620 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 PRAMEF2O60811 474 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 ENO1P06733 434 aaKnown RBP3.84□□□□□ -1.79
SRP54-214ENST00000630962 HMGB1P09429 215 aaKnown RBP3.84□□□□□ -1.79
SRP54-214ENST00000630962 ARP10275 920 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 TFEBP19484 476 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 DRD1P21728 446 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 RPS6KB1P23443 525 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 HOXD12P35452 270 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 GNALP38405 381 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 CPA2P48052 419 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 ME1P48163 572 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 TM4SF4P48230 202 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 POLGP54098 1239 aaPredicted RBP3.84□□□□□ -1.79
SRP54-214ENST00000630962 ZNF91Q05481 1191 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 BFSP2Q13515 415 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 RABEP1Q15276 862 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 RBMS2Q15434 407 aaKnown RBP3.84□□□□□ -1.79
SRP54-214ENST00000630962 Q4G0T1 1027 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 IZUMO3Q5VZ72 239 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 FAM90A2PQ658T7 463 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 GRHL2Q6ISB3 625 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 CCDC144NLQ6NUI1 221 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 ACSM6Q6P461 480 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 PIM3Q86V86 326 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 RASGRP3Q8IV61 690 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 ARFGAP1Q8N6T3 406 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 ADPRHL1Q8NDY3 354 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 ACRBPQ8NEB7 543 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 WDR60Q8WVS4 1066 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 PIGKQ92643 395 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 AKAP1Q92667 903 aaKnown RBP eCLIP3.84□□□□□ -1.79
SRP54-214ENST00000630962 ZNF566Q969W8 418 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 FAR2Q96K12 515 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 ZFYVE19Q96K21 471 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 ZNF48Q96MX3 618 aaPredicted RBP3.84□□□□□ -1.79
SRP54-214ENST00000630962 TUBB6Q9BUF5 446 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.84□□□□□ -1.793e-7■■□□□ 11.4
SRP54-214ENST00000630962 ABHD10Q9NUJ1 306 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 POT1Q9NUX5 634 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 FBXO28Q9NVF7 368 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 IPO11Q9UI26 975 aaKnown RBP3.84□□□□□ -1.79
SRP54-214ENST00000630962 MAN2B2Q9Y2E5 1009 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 HEMK1Q9Y5R4 338 aaPredicted RBP3.84□□□□□ -1.79
SRP54-214ENST00000630962 HS3ST3B1Q9Y662 390 aa3.84□□□□□ -1.79
SRP54-214ENST00000630962 A0A087WZ62 844 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 F8W810 466 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 PLIN1O60240 522 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 CBFA2T3O75081 653 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 TULP3O75386 442 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 OAZ2O95190 189 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 PLAUP00749 431 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 SRGAP2BP0DMP2 458 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 SCP2P22307 547 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 EEF1GP26641 437 aaKnown RBP3.83□□□□□ -1.8
SRP54-214ENST00000630962 GABRB3P28472 473 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 SLC8A1P32418 973 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 THBS4P35443 961 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 PBX1P40424 430 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 HNRNPA0Q13151 305 aaKnown RBP3.83□□□□□ -1.8
SRP54-214ENST00000630962 KPNB1Q14974 876 aaKnown RBP3.83□□□□□ -1.8
SRP54-214ENST00000630962 TMEM196Q5HYL7 178 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 EARS2Q5JPH6 523 aaKnown RBP3.83□□□□□ -1.8
SRP54-214ENST00000630962 FAM209BQ5JX69 171 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 KLHDC7AQ5VTJ3 777 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 HIBCHQ6NVY1 386 aaPredicted RBP3.83□□□□□ -1.8
SRP54-214ENST00000630962 KSR2Q6VAB6 950 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 FAM57BQ71RH2 274 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 OR2C3Q8N628 320 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 ZNF366Q8N895 744 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 FAM47BQ8NA70 645 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 SRFBP1Q8NEF9 429 aaKnown RBP3.83□□□□□ -1.8
SRP54-214ENST00000630962 ZNF845Q96IR2 970 aaPredicted RBP3.83□□□□□ -1.8
SRP54-214ENST00000630962 CCDC138Q96M89 665 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 FCRL5Q96RD9 977 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 MYD88Q99836 296 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 NAA15Q9BXJ9 866 aaKnown RBP3.83□□□□□ -1.8
SRP54-214ENST00000630962 SAP30LQ9HAJ7 183 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 PAPOLBQ9NRJ5 636 aaKnown RBP3.83□□□□□ -1.8
SRP54-214ENST00000630962 MTMR4Q9NYA4 1195 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 AFG3L2Q9Y4W6 797 aa3.83□□□□□ -1.8
SRP54-214ENST00000630962 EMSYQ7Z589 1322 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 FAM90A10PA6NDY2 464 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 APAF1O14727 1248 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 TNFSF4P23510 183 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 RAE1P78406 368 aaKnown RBP3.82□□□□□ -1.8
SRP54-214ENST00000630962 B4GALNT1Q00973 533 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 KRTAP1-1Q07627 177 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 RBM44Q6ZP01 1051 aaKnown RBP3.82□□□□□ -1.8
SRP54-214ENST00000630962 KRT27Q7Z3Y8 459 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 NSMCE1Q8WV22 266 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 PAAF1Q9BRP4 392 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 HTATIP2Q9BUP3 242 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 TTLL2Q9BWV7 592 aa3.82□□□□□ -1.8
SRP54-214ENST00000630962 TMEM8AQ9HCN3 771 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms