RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 NUP85Q9BW27 656 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CARD9Q9H257 536 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 HAUS4Q9H6D7 363 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 SARS2Q9NP81 518 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 LMBRD1Q9NUN5 540 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 TRPM5Q9NZQ8 1165 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 AMACRQ9UHK6 382 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 MAD2L2Q9UI95 211 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 FAM205AQ6ZU69 1335 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 UTRNP46939 3433 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 NLRP1Q9C000 1473 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 PRDM15P57071 1507 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CLCA1A8K7I4 914 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 WNT9AO14904 365 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 NPHS1O60500 1241 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 PSMD10O75832 226 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 IDH1O75874 414 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 ACTL6BO94805 426 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 ANXA1P04083 346 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 RPSAP08865 295 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 MYBL1P10243 752 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 EPB41P11171 864 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 UBL4AP11441 157 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 PTBP1P26599 531 aaKnown RBP eCLIP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 TTKP33981 857 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 MDH1P40925 334 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CAPZA2P47755 286 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 AARSP49588 968 aaKnown RBP eCLIP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CLCNKAP51800 687 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 RARSP54136 660 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 MLLT6P55198 1093 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 IL24Q13007 206 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 GPS1Q13098 491 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 KCNAB2Q13303 367 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 RPS6KA2Q15349 733 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CYP2A13Q16696 494 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 ARHGAP44Q17R89 818 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 PAN2Q504Q3 1202 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 C3orf38Q5JPI3 329 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 MBNL2Q5VZF2 373 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 NEK5Q6P3R8 708 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 INO80CQ6PI98 192 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 LRFN4Q6PJG9 635 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 FAM111BQ6SJ93 734 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 ATG14Q6ZNE5 492 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 SEPT14Q6ZU15 432 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CDH24Q86UP0 819 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 MCEMP1Q8IX19 187 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 SP8Q8IXZ3 490 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 EFCAB13Q8IY85 973 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CISD2Q8N5K1 135 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 WNT2BQ93097 391 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 SLC22A18Q96BI1 424 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 APOPT1Q96IL0 206 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 ZFYVE21Q9BQ24 234 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 SYT17Q9BSW7 474 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 NTMT1Q9BV86 223 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CDK19Q9BWU1 502 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 TMEM206Q9H813 350 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 LTB4R2Q9NPC1 389 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 SDHAF3Q9NRP4 125 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 FAM114A2Q9NRY5 505 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 TOMM22Q9NS69 142 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 EHD3Q9NZN3 535 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 MARCH4Q9P2E8 410 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 HDAC6Q9UBN7 1215 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 LPAR3Q9UBY5 353 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CORO1CQ9ULV4 474 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 DLGAP4Q9Y2H0 992 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 HS3ST4Q9Y661 456 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 ATRNO75882 1429 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 UNC13BO14795 1591 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 KIF7Q2M1P5 1343 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 FANCIQ9NVI1 1328 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 KIAA1217Q5T5P2 1943 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 NPIPB15A6NHN6 443 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 SLC9B1P1A6NJY1 282 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 OR6C65A6NJZ3 312 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 E9PBE3 544 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 H7C1D1 291 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 KRIT1O00522 736 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 AXIN1O15169 862 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 TGFB1I1O43294 461 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 MSCO60682 206 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 MMP20O60882 483 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 DIRAS3O95661 229 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 PTBP3O95758 552 aaKnown RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 CHRNA1P02708 482 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 NCF1P14598 390 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 CASTP20810 708 aaKnown RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 CD247P20963 164 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 PTPN3P26045 913 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 GABRB3P28472 473 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 RPL9P32969 192 aaKnown RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 ECI1P42126 302 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 CCT8P50990 548 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 POLE2P56282 527 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 EIF3EP60228 445 aaKnown RBP5.07□□□□□ -1.6
SDCBP-213ENST00000630925 B2MP61769 119 aa5.07□□□□□ -1.6
SDCBP-213ENST00000630925 DHX9Q08211 1270 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms