RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 FYNP06241 537 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 BCKDHBP21953 392 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 MFAP3P55082 362 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 LMNB2Q03252 620 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 CSRP2Q16527 193 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 TPD52L1Q16890 204 aaPredicted RBP11.25□□□□□ -0.61
CHD2-217ENST00000629136 ARHGAP44Q17R89 818 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 RSPO4Q2I0M5 234 aaPredicted RBP11.25□□□□□ -0.61
CHD2-217ENST00000629136 DPY19L2P1Q6NXN4 242 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 DENND1BQ6P3S1 775 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 PRR23CQ6ZRP0 262 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 RBM43Q6ZSC3 357 aaKnown RBP11.25□□□□□ -0.61
CHD2-217ENST00000629136 TRMT11Q7Z4G4 463 aaKnown RBP11.25□□□□□ -0.61
CHD2-217ENST00000629136 KCNV2Q8TDN2 545 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 RNF139Q8WU17 664 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 ZNF606Q8WXB4 792 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 SHC3Q92529 594 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 LOXL4Q96JB6 756 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 FAM81BQ96LP2 452 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 MIS12Q9H081 205 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 ARRDC1-AS1Q9H2J1 176 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 NDST4Q9H3R1 872 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 POLMQ9NP87 494 aaPredicted RBP11.25□□□□□ -0.61
CHD2-217ENST00000629136 TJP2Q9UDY2 1190 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 STOML2Q9UJZ1 356 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 CLEC4EQ9ULY5 219 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 INVSQ9Y283 1065 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 SLC27A6Q9Y2P4 619 aa11.25□□□□□ -0.61
CHD2-217ENST00000629136 A0A1W2PQF6 199 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 E5RJQ4 531 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 THAP12O43422 761 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 ALDH1A2O94788 518 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 LATS1O95835 1130 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 PNMA6AP0CW24 399 aaPredicted RBP11.24□□□□□ -0.61
CHD2-217ENST00000629136 HOXB2P14652 356 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 HOXD9P28356 352 aaPredicted RBP11.24□□□□□ -0.61
CHD2-217ENST00000629136 NTSR1P30989 418 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 P2RY2P41231 377 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 WASP42768 502 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 SGSHP51688 502 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 CCDC6Q16204 474 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 GEN1Q17RS7 908 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 PLA2G2CQ5R387 149 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 PMS2CLQ68D20 193 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 NUDT18Q6ZVK8 323 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 FAM114A1Q8IWE2 563 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 FRMD1Q8N878 549 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 HMGB4Q8WW32 186 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 PIWIL1Q96J94 861 aaKnown RBP11.24□□□□□ -0.61
CHD2-217ENST00000629136 GABRG3Q99928 467 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 TUBGCP2Q9BSJ2 902 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 SLC4A5Q9BY07 1137 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 ST7Q9NRC1 585 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 SAMSN1Q9NSI8 373 aaKnown RBP11.24□□□□□ -0.61
CHD2-217ENST00000629136 DACH1Q9UI36 760 aa11.24□□□□□ -0.61
CHD2-217ENST00000629136 PCDH15Q96QU1 1955 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 SDK1Q7Z5N4 2213 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 PRR5-ARHGAP8B1AHC4 643 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 KCNJ18B7U540 433 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 PAPSS1O43252 624 aaPredicted RBP11.23□□□□□ -0.61
CHD2-217ENST00000629136 MED7O43513 233 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 GDF9O60383 454 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 CYBBP04839 570 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 NCAM1P13591 858 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 GABRG2P18507 467 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 GBP1P32455 592 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 MPLP40238 635 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 ACADSBP45954 432 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 HARS2P49590 506 aaKnown RBP11.23□□□□□ -0.61
CHD2-217ENST00000629136 ARHGAP8P85298 464 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 RING1Q06587 406 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 KCNMA1Q12791 1236 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 PDCLQ13371 301 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 KCNJ12Q14500 433 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 PUM1Q14671 1186 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHD2-217ENST00000629136 SF3A2Q15428 464 aaKnown RBP11.23□□□□□ -0.61
CHD2-217ENST00000629136 ELF2Q15723 593 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 VWA3BQ502W6 1294 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 USP39Q53GS9 565 aaKnown RBP11.23□□□□□ -0.61
CHD2-217ENST00000629136 FAM133BQ5BKY9 247 aaKnown RBP11.23□□□□□ -0.61
CHD2-217ENST00000629136 TMEM215Q68D42 235 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 KIAA1211LQ6NV74 962 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 ERMP1Q7Z2K6 904 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 ANKS1BQ7Z6G8 1248 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 SCUBE3Q8IX30 993 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 CHPFQ8IZ52 775 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 DQX1Q8TE96 717 aaKnown RBP11.23□□□□□ -0.61
CHD2-217ENST00000629136 DDI1Q8WTU0 396 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 STK32AQ8WU08 396 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 RLN3Q8WXF3 142 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 SMOC1Q9H4F8 434 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 RXFP3Q9NSD7 469 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 CACNA2D2Q9NY47 1150 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 BCCIPQ9P287 314 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHD2-217ENST00000629136 MBD1Q9UIS9 605 aaPredicted RBP11.23□□□□□ -0.61
CHD2-217ENST00000629136 PCDHGC3Q9UN70 934 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 NAALADL1Q9UQQ1 740 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 PCDHGA5Q9Y5G8 931 aa11.23□□□□□ -0.61
CHD2-217ENST00000629136 WASH3PC4AMC7 463 aa11.22□□□□□ -0.61
CHD2-217ENST00000629136 SART1O43290 800 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms