RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 DPF2Q92785 391 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 UPF1Q92900 1129 aaKnown RBP eCLIP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 S100PBPQ96BU1 408 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 GMCL1Q96IK5 515 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CAPZA3Q96KX2 299 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CSRNP1Q96S65 589 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 HGH1Q9BTY7 390 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CINPQ9BW66 212 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 FRMD8P1Q9BZ68 369 aaPredicted RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 IMPG2Q9BZV3 1241 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TRIM2Q9C040 744 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF700Q9H0M5 742 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 CNOT10Q9H9A5 744 aaKnown RBP4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 TXLNGQ9NUQ3 528 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 RABGEF1Q9UJ41 708 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 GMEB2Q9UKD1 530 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 PCDHA7Q9UN72 937 aa4.01□□□□□ -1.77
R3HDM1-220ENST00000628915 NPHP4O75161 1426 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 PGRMC1O00264 195 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 DCLK1O15075 740 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 GPC4O75487 556 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 PRDM1O75626 825 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 TOM1L1O75674 476 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 BAG3O95817 575 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 MT-CO1P00395 513 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 CYP11A1P05108 521 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 ASGR1P07306 291 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 FAM228BP0C875 321 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 TNNI3P19429 210 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 M6PRP20645 277 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 MAT2AP31153 395 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 GJC1P36383 396 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 CD79BP40259 229 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 HSD17B4P51659 736 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 NDUFA8P51970 172 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 PRAMEP78395 509 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 NECTIN1Q15223 517 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 ZC2HC1CQ53FD0 456 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 TRAPPC3LQ5T215 181 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 CACHD1Q5VU97 1274 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 SPOPLQ6IQ16 392 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 LRIG3Q6UXM1 1119 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 COPS6Q7L5N1 327 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 VASH1Q7L8A9 365 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 DPPA2Q7Z7J5 298 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 UNC5CLQ8IV45 518 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 AFAP1L2Q8N4X5 818 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 ZSCAN1Q8NBB4 408 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 PCSK9Q8NBP7 692 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 BEST2Q8NFU1 509 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 OR6B3Q8NGW1 331 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 CLHC1Q8NHS4 586 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 OXER1Q8TDS5 423 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 RAPGEF4Q8WZA2 1011 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 ZNF669Q96BR6 464 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 ACSF2Q96CM8 615 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 MCRS1Q96EZ8 462 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 CALML4Q96GE6 196 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 VCPIP1Q96JH7 1222 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 UBXN10Q96LJ8 280 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC2A13Q96QE2 648 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 RAB3IPQ96QF0 476 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 WACQ9BTA9 647 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 NDST4Q9H3R1 872 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 PNO1Q9NRX1 252 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 ADPRHL2Q9NX46 363 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 STK32BQ9NY57 414 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 REV1Q9UBZ9 1251 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 MID2Q9UJV3 735 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 DOLKQ9UPQ8 538 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 ERVK-11Q9UQG0 969 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 DERAQ9Y315 318 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 LMO7Q8WWI1 1683 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 PARP4Q9UKK3 1724 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 GSAPA4D1B5 854 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 DCDC2CA8MYV0 355 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 HMBSP08397 361 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 VCLP18206 1134 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 DDX6P26196 483 aaKnown RBP eCLIP4□□□□□ -1.77
R3HDM1-220ENST00000628915 PTBP1P26599 531 aaKnown RBP eCLIP4□□□□□ -1.775e-8■■■■■ 40.5
R3HDM1-220ENST00000628915 CD40LGP29965 261 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 TLX1P31314 330 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 PIK3CBP42338 1070 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 PAFAH1B1P43034 410 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 SYKP43405 635 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 PIP4K2AP48426 406 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 SEC24CP53992 1094 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 MRPS9P82933 396 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 CENPCQ03188 943 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 GFPT1Q06210 699 aaPredicted RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 UBE3CQ15386 1083 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 CCDC58Q4VC31 144 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 C6orf132Q5T0Z8 1188 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 SEL1L2Q5TEA6 688 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 VWA5B1Q5TIE3 1220 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 AFMIDQ63HM1 303 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 HEATR6Q6AI08 1181 aaKnown RBP4□□□□□ -1.77
R3HDM1-220ENST00000628915 NUDT13Q86X67 352 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 PLD3Q8IV08 490 aa4□□□□□ -1.77
R3HDM1-220ENST00000628915 SLC38A6Q8IZM9 456 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms