RNA–Protein interactions for RNA: ENST00000625349.2

LUC7L3-223, Transcript of LUC7 like 3 pre-mRNA splicing factor, human

TSL 2 BASIC

Gene LUC7L3, Length 408 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LUC7L3-223	ENST00000625349	SCNN1A	P37088	669 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	NOP2	P46087	812 aa	Known RBP	13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	NAP1L1	P55209	391 aa	Known RBP	13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	CDH8	P55286	799 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	SHC2	P98077	582 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	SMARCB1	Q12824	385 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	AASDH	Q4L235	1098 aa	Predicted RBP	13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	SLC39A12	Q504Y0	691 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	TMEM196	Q5HYL7	178 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	TAF3	Q5VWG9	929 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	ZDHHC17	Q8IUH5	632 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	OR10T2	Q8NGX3	314 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	C2orf15	Q8WU43	125 aa	Known RBP	13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	PBK	Q96KB5	322 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	HEXIM2	Q96MH2	286 aa	Known RBP	13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	GCNA	Q96QF7	691 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	LPIN3	Q9BQK8	851 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	FAM83C	Q9BQN1	747 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	UBXN6	Q9BZV1	441 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	ZCWPW1	Q9H0M4	648 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	THAP2	Q9H0W7	228 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	SNX25	Q9H3E2	840 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	TAS2R14	Q9NYV8	317 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	ADAM22	Q9P0K1	906 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	TRIM10	Q9UDY6	481 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	SNX12	Q9UMY4	172 aa		13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.22	□□□□□ -0.29
LUC7L3-223	ENST00000625349	GRID2IP	A4D2P6	1211 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	TRDMT1	O14717	391 aa	Known RBP	13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	FANCG	O15287	622 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	CTIF	O43310	598 aa	Known RBP	13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	ATG13	O75143	517 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	PALM	O75781	387 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	RPP40	O75818	363 aa	Known RBP	13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	CLSTN1	O94985	981 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	SLU7	O95391	586 aa	Known RBP	13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	MOCS3	O95396	460 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	PCSK1	P29120	753 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	MAN1A1	P33908	653 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	RPL34	P49207	117 aa	Known RBP	13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	CYP4F8	P98187	520 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	PTP4A2	Q12974	167 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	SF3A2	Q15428	464 aa	Known RBP	13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	MGAT5B	Q3V5L5	792 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	PKDCC	Q504Y2	493 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	PLA2G2C	Q5R387	149 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	SCARA3	Q6AZY7	606 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	PKN3	Q6P5Z2	889 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	ARC	Q7LC44	396 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	ERICH1	Q86X53	443 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	CMTM8	Q8IZV2	173 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	C12orf50	Q8NA57	414 aa	Predicted RBP	13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	FNIP1	Q8TF40	1166 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	KBTBD7	Q8WVZ9	684 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	TFAP2B	Q92481	460 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	SEPT5	Q99719	369 aa	Predicted RBP	13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	NCAPG	Q9BPX3	1015 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	TLR10	Q9BXR5	811 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	SLC46A2	Q9BY10	475 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	ELOVL4	Q9GZR5	314 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	ARRDC1-AS1	Q9H2J1	176 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	ACP6	Q9NPH0	428 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.21	□□□□□ -0.29	6e-7	■■■■□ 21.1
LUC7L3-223	ENST00000625349	GKN1	Q9NS71	199 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	TMEM51	Q9NW97	253 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	CTTNBP2NL	Q9P2B4	639 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	CNOT8	Q9UFF9	292 aa	Known RBP	13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	ANGPTL2	Q9UKU9	493 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	HYOU1	Q9Y4L1	999 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	PCDHGA5	Q9Y5G8	931 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	CAPN6	Q9Y6Q1	641 aa		13.21	□□□□□ -0.29
LUC7L3-223	ENST00000625349	TSC2	P49815	1807 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	EFCAB8	A8MWE9	144 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349		A8MXQ7	604 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CYB561D2	O14569	222 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	AXIN1	O15169	862 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ZIC2	O95409	532 aa	Predicted RBP	13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	TUBB	P07437	444 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CD19	P15391	556 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	GPD2	P43304	727 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ACADSB	P45954	432 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CKAP4	Q07065	602 aa	Known RBP	13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	RUNX3	Q13761	415 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	RPS6KA1	Q15418	735 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	MAPRE1	Q15691	268 aa	Known RBP	13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	NAA35	Q5VZE5	725 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	FSTL4	Q6MZW2	842 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	KBTBD6	Q86V97	674 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ADGRF2	Q8IZF7	708 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	WDTC1	Q8N5D0	677 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ANKRD52	Q8NB46	1076 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	C3orf20	Q8ND61	904 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	C1orf131	Q8NDD1	294 aa	Known RBP	13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	SPPL2B	Q8TCT7	592 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ZNF653	Q96CK0	615 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CHFR	Q96EP1	664 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms