RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 PCOLCE2Q9UKZ9 415 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 GPSM3Q9Y4H4 160 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 PCDHA5Q9Y5H7 936 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 KNTC1P50748 2209 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 TMEM131Q92545 1883 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 METTL12A8MUP2 240 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 CLSTN1O94985 981 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 IGLV3-19P01714 112 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 NCAM1P13591 858 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 P4HA1P13674 534 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 CORO1AP31146 461 aaKnown RBP11.6□□□□□ -0.55
DDX41-218ENST00000625286 PIK3CAP42336 1068 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 ME1P48163 572 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 VAMP7P51809 220 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 MCCD1P59942 119 aaPredicted RBP11.6□□□□□ -0.55
DDX41-218ENST00000625286 EFEMP1Q12805 493 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 ZNF234Q14588 700 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 ZNF394Q53GI3 561 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 DCAF12L1Q5VU92 463 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 CEP135Q66GS9 1140 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 BHLHA9Q7RTU4 235 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 ZCCHC9Q8N567 271 aaKnown RBP11.6□□□□□ -0.55
DDX41-218ENST00000625286 BAHD1Q8TBE0 780 aaPredicted RBP11.6□□□□□ -0.55
DDX41-218ENST00000625286 FOXJ1Q92949 421 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 NT5C1AQ9BXI3 368 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 PNPLA8Q9NP80 782 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 ELOVL2Q9NXB9 296 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 CLIC5Q9NZA1 410 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 RCOR1Q9UKL0 485 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 TRAF3IP3Q9Y228 551 aa11.6□□□□□ -0.55
DDX41-218ENST00000625286 FNDC3AQ9Y2H6 1198 aaKnown RBP11.6□□□□□ -0.55
DDX41-218ENST00000625286 A0A1B0GTW7 788 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 TULP2O00295 520 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 KIF20AO95235 890 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 F13A1P00488 732 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 PRR29P0C7W0 189 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 ZSCAN22P10073 491 aaPredicted RBP11.59□□□□□ -0.55
DDX41-218ENST00000625286 HLA-EP13747 358 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 DNM1Q05193 864 aaKnown RBP11.59□□□□□ -0.55
DDX41-218ENST00000625286 HLA-BQ31612 363 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 RAB41Q5JT25 222 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 WDR45BQ5MNZ6 344 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 SYCP2LQ5T4T6 812 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 GLRX5Q86SX6 157 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 CACUL1Q86Y37 369 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 DENND1CQ8IV53 801 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 FAM217AQ8IXS0 508 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 ZC3H3Q8IXZ2 948 aaKnown RBP11.59□□□□□ -0.55
DDX41-218ENST00000625286 SLC4A11Q8NBS3 891 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 CADM4Q8NFZ8 388 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 ARID3AQ99856 593 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 MIR1-1HGQ9H1L0 117 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 GAREM1Q9H706 876 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 CYP3A43Q9HB55 503 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 EXOC1Q9NV70 894 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 FAM13BQ9NYF5 915 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 EIF2B4Q9UI10 523 aaKnown RBP11.59□□□□□ -0.55
DDX41-218ENST00000625286 RASAL2Q9UJF2 1139 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 BTBD3Q9Y2F9 522 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 NFE2L3Q9Y4A8 694 aa11.59□□□□□ -0.55
DDX41-218ENST00000625286 GCN1Q92616 2671 aaKnown RBP11.59□□□□□ -0.55
DDX41-218ENST00000625286 A0A1B0GVL5 298 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 ZBTB24O43167 697 aaPredicted RBP11.58□□□□□ -0.56
DDX41-218ENST00000625286 GABBR2O75899 941 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 DKK1O94907 266 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 ATXN1LP0C7T5 689 aaKnown RBP11.58□□□□□ -0.56
DDX41-218ENST00000625286 C7P10643 843 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 GNSP15586 552 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 ACSL1P33121 698 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 CSNK1EP49674 416 aaKnown RBP11.58□□□□□ -0.56
DDX41-218ENST00000625286 RAD23BP54727 409 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 GOLGA8FQ08AF8 430 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 GOLGA8DPQ0D2H9 430 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 HNRNPDQ14103 355 aaKnown RBP11.58□□□□□ -0.56
DDX41-218ENST00000625286 SOWAHCQ53LP3 525 aaPredicted RBP11.58□□□□□ -0.56
DDX41-218ENST00000625286 KCNT1Q5JUK3 1230 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 FAM124AQ86V42 546 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 PIGZQ86VD9 579 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 ZNF366Q8N895 744 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 MDM1Q8TC05 714 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 TATDN2Q93075 761 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 SIPA1Q96FS4 1042 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 HEXIM2Q96MH2 286 aaKnown RBP11.58□□□□□ -0.56
DDX41-218ENST00000625286 NIF3L1Q9GZT8 377 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 C6orf106Q9H6K1 298 aaPredicted RBP11.58□□□□□ -0.56
DDX41-218ENST00000625286 SUSD2Q9UGT4 822 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 MAPK8IP1Q9UQF2 711 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 HPSEQ9Y251 543 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 PCDHB9Q9Y5E1 797 aa11.58□□□□□ -0.56
DDX41-218ENST00000625286 MUC22E2RYF6 1773 aaPredicted RBP11.58□□□□□ -0.56
DDX41-218ENST00000625286 A0A1B0GVT2 93 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 SLC12A8A0AV02 714 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 MEI4A8MW99 385 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 KCNK3O14649 394 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 MAPK13O15264 365 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 BCAT2O15382 392 aaPredicted RBP11.57□□□□□ -0.56
DDX41-218ENST00000625286 TSPAN3O60637 253 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 RALAP11233 206 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 PFKFB1P16118 471 aa11.57□□□□□ -0.56
DDX41-218ENST00000625286 HOXD9P28356 352 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms