RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 COILP38432 576 aaPredicted RBP12.22□□□□□ -0.45
LINC00963-220ENST00000625171 NR2C2P49116 596 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 GPR15P49685 360 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 TAF10Q12962 218 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 ADGRE1Q14246 886 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 VEPH1Q14D04 833 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 CDO1Q16878 200 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 AAK1Q2M2I8 961 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 PABPC1LQ4VXU2 614 aaKnown RBP12.22□□□□□ -0.45
LINC00963-220ENST00000625171 KCNT1Q5JUK3 1230 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 TEX35Q5T0J7 233 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 SCYL2Q6P3W7 929 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 TMC7Q7Z402 723 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 ITIH5Q86UX2 942 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 ATL2Q8NHH9 583 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 RNF139Q8WU17 664 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 PPM1EQ8WY54 764 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 ANKRD7Q92527 254 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 FBXO32Q969P5 355 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 TGS1Q96RS0 853 aaKnown RBP12.22□□□□□ -0.45
LINC00963-220ENST00000625171 SEPT5Q99719 369 aaPredicted RBP12.22□□□□□ -0.45
LINC00963-220ENST00000625171 HERPUD2Q9BSE4 406 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 AP1M1Q9BXS5 423 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 FAM129AQ9BZQ8 928 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 DCLK3Q9C098 648 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 LMAN2LQ9H0V9 348 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 PLEKHA4Q9H4M7 779 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 WDCPQ9H6R7 721 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 NMUR1Q9HB89 426 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 CYP4F11Q9HBI6 524 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 TLR9Q9NR96 1032 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 DDIT4Q9NX09 232 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 OSER1Q9NX31 292 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.22□□□□□ -0.453e-8■■■■□ 21.6
LINC00963-220ENST00000625171 SMARCAL1Q9NZC9 954 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 AP4E1Q9UPM8 1137 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 YIPF1Q9Y548 306 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 KIAA1671Q9BY89 1806 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 A0A1W2PQH9 124 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 TCRBV7S2A1N4TA0A589 114 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 CCDC151A5D8V7 595 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 KCNU1A8MYU2 1149 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 C2CD2LO14523 706 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 TGM5O43548 720 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 IGLV3-27P01718 113 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 TGM2P21980 687 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 CCR1P32246 355 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 CTNNB1P35222 781 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 PTGIRP43119 386 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 RABGGTBP53611 331 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 EPHB3P54753 998 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 CDH6P55285 790 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 ERVFC1P60507 584 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 PITX1P78337 314 aaPredicted RBP12.21□□□□□ -0.45
LINC00963-220ENST00000625171 C2orf54Q08AI8 447 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 CAMK1Q14012 370 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 BRD3Q15059 726 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 RAB6CQ53S08 254 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 C8orf74Q6P047 294 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 TAC4Q86UU9 113 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 CCDC50Q8IVM0 306 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 SLC35B2Q8TB61 432 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 SLC7A14Q8TBB6 771 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 POF1BQ8WVV4 589 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 AZIN2Q96A70 460 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 MAGOHBQ96A72 148 aaKnown RBP12.21□□□□□ -0.45
LINC00963-220ENST00000625171 KRT12Q99456 494 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 TCF25Q9BQ70 676 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 PARD6BQ9BYG5 372 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 RAB6CQ9H0N0 254 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 SLC28A3Q9HAS3 691 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 GDF3Q9NR23 364 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC00963-220ENST00000625171 STIM2Q9P246 746 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 DPP7Q9UHL4 492 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 RAPGEFL1Q9UHV5 662 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 HBS1LQ9Y450 684 aaKnown RBP12.21□□□□□ -0.45
LINC00963-220ENST00000625171 INSL5Q9Y5Q6 135 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 RAD54BQ9Y620 910 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 PIEZO1Q92508 2521 aa12.21□□□□□ -0.45
LINC00963-220ENST00000625171 GREB1Q4ZG55 1949 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 ZNF840PA6NDX5 716 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 GRXCR1A8MXD5 290 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 PI4K2BG5E9Z4 385 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 ITGAVP06756 1048 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 RARGP13631 454 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 H2AFXP16104 143 aaPredicted RBP12.2□□□□□ -0.46
LINC00963-220ENST00000625171 IGFBP4P22692 258 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 HOXC13P31276 330 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 STIP1P31948 543 aaKnown RBP12.2□□□□□ -0.46
LINC00963-220ENST00000625171 PGFP49763 221 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 MLLT6P55198 1093 aaPredicted RBP12.2□□□□□ -0.46
LINC00963-220ENST00000625171 ADCY2Q08462 1091 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 XRCC4Q13426 336 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 TRIP4Q15650 581 aaPredicted RBP12.2□□□□□ -0.46
LINC00963-220ENST00000625171 ELF2Q15723 593 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 SMTNL2Q2TAL5 461 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 ANKRD20A8PQ5CZ79 823 aa12.2□□□□□ -0.46
LINC00963-220ENST00000625171 ZC3H12AQ5D1E8 599 aaKnown RBP12.2□□□□□ -0.46
LINC00963-220ENST00000625171 EFHC2Q5JST6 749 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms