RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TRMT61AQ96FX7 289 aaKnown RBP5.13□□□□□ -1.59
BRCA1-229ENST00000621897 FOXP1Q9H334 677 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-229ENST00000621897 SLC22A23A1A5C7 686 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 FAM234BA2RU67 622 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 OR2W5A6NFC9 320 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 M0QZQ0 153 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 ZSCAN9O15535 394 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-229ENST00000621897 ALADP13716 330 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 EGR1P18146 543 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 NDUFS1P28331 727 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 HOXA7P31268 230 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-229ENST00000621897 VPS41P49754 854 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 LINC00205P59089 165 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 HSF1Q00613 529 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 MAPK7Q13164 816 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 ATP1A4Q13733 1029 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 CNGA3Q16281 694 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 FAM110CQ1W6H9 321 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 SLC5A9Q2M3M2 681 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 EARS2Q5JPH6 523 aaKnown RBP5.12□□□□□ -1.59
BRCA1-229ENST00000621897 PIK3AP1Q6ZUJ8 805 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 ANKRD13BQ86YJ7 626 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 CCAR1Q8IX12 1150 aaKnown RBP5.12□□□□□ -1.59
BRCA1-229ENST00000621897 CLASRPQ8N2M8 674 aaKnown RBP5.12□□□□□ -1.59
BRCA1-229ENST00000621897 PJA1Q8NG27 643 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 VCPIP1Q96JH7 1222 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 SNX27Q96L92 541 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 STARD7Q9NQZ5 370 aa5.12□□□□□ -1.59
BRCA1-229ENST00000621897 CCDC187A0A096LP49 1063 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-229ENST00000621897 KRTAP29-1A8MX34 341 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-229ENST00000621897 ST6GAL1P15907 406 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 TNFSF4P23510 183 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 DUSP1P28562 367 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 IGHMBP2P38935 993 aaKnown RBP5.11□□□□□ -1.59
BRCA1-229ENST00000621897 CPA2P48052 419 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 MTX1Q13505 466 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 STIM1Q13586 685 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 SLC35G1Q2M3R5 365 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 ARL13BQ3SXY8 428 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 FAM209BQ5JX69 171 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 CCDC144NLQ6NUI1 221 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 KYAT3Q6YP21 454 aaKnown RBP5.11□□□□□ -1.59
BRCA1-229ENST00000621897 UBE2Q1Q7Z7E8 422 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 TXLNBQ8N3L3 684 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 PIGKQ92643 395 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 AKAP1Q92667 903 aaKnown RBP eCLIP5.11□□□□□ -1.59
BRCA1-229ENST00000621897 GRAMD1AQ96CP6 724 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 P2RY11Q96G91 374 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 ASNSD1Q9NWL6 643 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 RGL1Q9NZL6 768 aa5.11□□□□□ -1.59
BRCA1-229ENST00000621897 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-229ENST00000621897 KIF3BO15066 747 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 DHHO43323 396 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 KCNAB3O43448 404 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 TMEM191BP0C7N4 346 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 RPS6KB1P23443 525 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 HOXD12P35452 270 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 TM4SF4P48230 202 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 SEMA3BQ13214 749 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 MTA1Q13330 715 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 FHL1Q13642 323 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 ELF2Q15723 593 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 LONRF1Q17RB8 773 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 LEXMQ3ZCV2 418 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 TLDC1Q6P9B6 456 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 ZNF793Q6ZN11 406 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 RBM44Q6ZP01 1051 aaKnown RBP5.1□□□□□ -1.59
BRCA1-229ENST00000621897 RFX6Q8HWS3 928 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 PARD3BQ8TEW8 1205 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 ZFYVE19Q96K21 471 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 WACQ9BTA9 647 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 RNF26Q9BY78 433 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-229ENST00000621897 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.1□□□□□ -1.59
BRCA1-229ENST00000621897 FSCN3Q9NQT6 498 aa5.1□□□□□ -1.59
BRCA1-229ENST00000621897 PROB1E7EW31 1015 aa5.09□□□□□ -1.59
BRCA1-229ENST00000621897 MATN1P21941 496 aa5.09□□□□□ -1.59
BRCA1-229ENST00000621897 GNALP38405 381 aa5.09□□□□□ -1.59
BRCA1-229ENST00000621897 GSTM5P46439 218 aa5.09□□□□□ -1.59
BRCA1-229ENST00000621897 AGTR2P50052 363 aa5.09□□□□□ -1.59
BRCA1-229ENST00000621897 ZNF84P51523 738 aa5.09□□□□□ -1.59
BRCA1-229ENST00000621897 FOXG1P55316 489 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-229ENST00000621897 ACSM6Q6P461 480 aa5.09□□□□□ -1.59
BRCA1-229ENST00000621897 C16orf89Q6UX73 402 aa5.09□□□□□ -1.59
BRCA1-229ENST00000621897 CELF1Q92879 486 aaKnown RBP5.09□□□□□ -1.59
BRCA1-229ENST00000621897 RIPOR3Q96MK2 946 aa5.09□□□□□ -1.59
BRCA1-229ENST00000621897 CDCP1Q9H5V8 836 aa5.09□□□□□ -1.59
BRCA1-229ENST00000621897 RXFP3Q9NSD7 469 aa5.09□□□□□ -1.59
BRCA1-229ENST00000621897 RASA4BC9J798 803 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 TRIM38O00635 465 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 CTIFO43310 598 aaKnown RBP5.08□□□□□ -1.6
BRCA1-229ENST00000621897 RASA4O43374 803 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 FGF18O76093 207 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 VIPP01282 170 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 PSG1P11464 419 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 IDEP14735 1019 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 TNFRSF1BP20333 461 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 STAT6P42226 847 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 SOX2P48431 317 aa5.08□□□□□ -1.6
BRCA1-229ENST00000621897 POLGP54098 1239 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms