RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 UTP6Q9NYH9 597 aaKnown RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 DNPEPQ9ULA0 475 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 COL16A1Q07092 1604 aaPredicted RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 PLCH1Q4KWH8 1693 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 FRMD3A2A2Y4 597 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 TRIM49D1C9J1S8 452 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 LZTS3O60299 673 aaPredicted RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 CLASP2O75122 1294 aaKnown RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 SRP72O76094 671 aaKnown RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 KITP10721 976 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 SMPD1P17405 629 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 BMP6P22004 513 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 AARSP49588 968 aaKnown RBP eCLIP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 SESN3P58005 492 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 DMTNQ08495 405 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 BRMS1LQ5PSV4 323 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 ATG4AQ8WYN0 398 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 FAM118BQ9BPY3 351 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 ZNF670Q9BS34 389 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 NTPCRQ9BSD7 190 aaKnown RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 HIPK3Q9H422 1215 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 ATP13A1Q9HD20 1204 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 PSD3Q9NYI0 1048 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 DCTN4Q9UJW0 460 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 CDYLQ9Y232 598 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 TCP11X1B4DZS4 312 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 PMM2O15305 246 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 MPOP05164 745 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 CES1P23141 567 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 OR1E1P30953 314 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 PPIGQ13427 754 aaKnown RBP eCLIP9□□□□□ -0.97
PCDH15-233ENST00000621708 CD99L2Q8TCZ2 262 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 EDEM1Q92611 657 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 E2F7Q96AV8 911 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 CMTM5Q96DZ9 223 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 DUSP16Q9BY84 665 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 CLPBQ9H078 707 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 NT5MQ9NPB1 228 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 SLC39A10Q9ULF5 831 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 TFR2Q9UP52 801 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 USP15Q9Y4E8 981 aaPredicted RBP9□□□□□ -0.97
PCDH15-233ENST00000621708 VIRMAQ69YN4 1812 aaKnown RBP9□□□□□ -0.97
PCDH15-233ENST00000621708 ZSCAN5CA6NGD5 496 aaPredicted RBP9□□□□□ -0.97
PCDH15-233ENST00000621708 SLCO1B7G3V0H7 640 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 AP5Z1O43299 807 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 LGR5O75473 907 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 GLP2RO95838 553 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 SYF2O95926 243 aaKnown RBP9□□□□□ -0.97
PCDH15-233ENST00000621708 STMN1P16949 149 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 YBX3P16989 372 aaKnown RBP eCLIP9□□□□□ -0.97
PCDH15-233ENST00000621708 PGAM1P18669 254 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 KDELR1P24390 212 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 NOMO3P69849 1222 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 LRRC14Q15048 493 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 C2CD6Q53TS8 623 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 ANGPTL8Q6UXH0 198 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 LRRC8DQ7L1W4 858 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 SCUBE3Q8IX30 993 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 MYLPFQ96A32 169 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 TMA16Q96EY4 203 aaKnown RBP9□□□□□ -0.97
PCDH15-233ENST00000621708 PRMT1Q99873 361 aaKnown RBP9□□□□□ -0.97
PCDH15-233ENST00000621708 VANGL2Q9ULK5 521 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 CNTNAP1P78357 1384 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 TMEM120BA0PK00 339 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 RBAK-RBAKDNI3L0D1 243 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 ANGPT2O15123 496 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 PRPF4O43172 522 aaKnown RBP eCLIP9□□□□□ -0.97
PCDH15-233ENST00000621708 EOMESO95936 686 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 FAM163BP0C2L3 166 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 CHKAP35790 457 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 TNFSF9P41273 254 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 POLR2LP62875 67 aaKnown RBP9□□□□□ -0.97
PCDH15-233ENST00000621708 KBTBD12Q3ZCT8 623 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 ARMC6Q6NXE6 501 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 PCYOX1LQ8NBM8 494 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 GLIS3Q8NEA6 775 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 IRGQQ8WZA9 623 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 DEFB118Q96PH6 123 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 ASAH2Q9NR71 780 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 UBA2Q9UBT2 640 aaPredicted RBP9□□□□□ -0.97
PCDH15-233ENST00000621708 ASGR1P07306 291 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 FMO1Q01740 532 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 KCNA10Q16322 511 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 PSMD5Q16401 504 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 PARP6Q2NL67 630 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 LGI2Q8N0V4 545 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 MYO1HQ8N1T3 1032 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 BRI3BPQ8WY22 251 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 TMEM121Q9BTD3 319 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 TLR10Q9BXR5 811 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 TKTL2Q9H0I9 626 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 PDZD7Q9H5P4 517 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 CASS4Q9NQ75 786 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 MORF4L1Q9UBU8 362 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 BAZ2BQ9UIF8 2168 aaKnown RBP9□□□□□ -0.97
PCDH15-233ENST00000621708 CBX4O00257 560 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 SYN3O14994 580 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 ZNF862O60290 1169 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 TSPAN1O60635 241 aa9□□□□□ -0.97
PCDH15-233ENST00000621708 ATP5BP06576 529 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms