RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 TRABD2AQ86V40 505 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 SLC44A2Q8IWA5 706 aaPredicted RBP4.04□□□□□ -1.76
MALAT1-216ENST00000620465 CCDC117Q8IWD4 279 aaPredicted RBP4.04□□□□□ -1.76
MALAT1-216ENST00000620465 OR1N1Q8NGS0 311 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 SLC22A17Q8WUG5 538 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 TRIM63Q969Q1 353 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 FAR2Q96K12 515 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 ISCA1Q9BUE6 129 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 RNF26Q9BY78 433 aaPredicted RBP4.04□□□□□ -1.76
MALAT1-216ENST00000620465 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 PRDM8Q9NQV8 689 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 ASIC5Q9NY37 505 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 FER1L4A9Z1Z3 1794 aa4.04□□□□□ -1.76
MALAT1-216ENST00000620465 CCDC187A0A096LP49 1063 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 KIF28PB7ZC32 967 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 BTBD19C9JJ37 291 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 UBE2Q2LH0YL09 131 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 PPP6R2O75170 966 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 GCATO75600 419 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 C1QL1O75973 258 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 IGLV2-14P01704 120 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 ALADP13716 330 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 PTH2RP49190 550 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 JAK3P52333 1124 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 PNLIPRP1P54315 467 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 MFSD13AQ14CX5 517 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 LARS2Q15031 903 aaKnown RBP4.03□□□□□ -1.76
MALAT1-216ENST00000620465 FAM187BQ17R55 369 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 TIGD6Q17RP2 521 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 CERKLQ49MI3 558 aaPredicted RBP4.03□□□□□ -1.76
MALAT1-216ENST00000620465 FCRLBQ6BAA4 426 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 JMJD6Q6NYC1 403 aaPredicted RBP4.03□□□□□ -1.76
MALAT1-216ENST00000620465 TMEM65Q6PI78 240 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 VSTM1Q6UX27 236 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 DCDC5Q6ZRR9 648 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 RINLQ6ZS11 566 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 RD3Q7Z3Z2 195 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 GALNT15Q8N3T1 639 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 FAM98AQ8NCA5 519 aaKnown RBP4.03□□□□□ -1.76
MALAT1-216ENST00000620465 OR52L2PQ8NGH6 319 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 OTUD7AQ8TE49 926 aaPredicted RBP4.03□□□□□ -1.76
MALAT1-216ENST00000620465 GLMPQ8WWB7 406 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 NELL1Q92832 810 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 PRR11Q96HE9 360 aaPredicted RBP4.03□□□□□ -1.76
MALAT1-216ENST00000620465 HIC2Q96JB3 615 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 SORBS1Q9BX66 1292 aaKnown RBP4.03□□□□□ -1.76
MALAT1-216ENST00000620465 ADGRE3Q9BY15 652 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 PABPC3Q9H361 631 aaKnown RBP4.03□□□□□ -1.76
MALAT1-216ENST00000620465 R3HDMLQ9H3Y0 253 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 PRDM13Q9H4Q3 707 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 MLXIPQ9HAP2 919 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 GAR1Q9NY12 217 aaKnown RBP4.03□□□□□ -1.76
MALAT1-216ENST00000620465 FZD4Q9ULV1 537 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 DAPP1Q9UN19 280 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 CNTN6Q9UQ52 1028 aa4.03□□□□□ -1.76
MALAT1-216ENST00000620465 SPATA31A6Q5VVP1 1343 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 FAM90A18PA6NE21 464 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 FAM90A16PA6NEW6 464 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 HMX3A6NHT5 357 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 FAM90A9PA6NNJ1 464 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 EFCAB8A8MWE9 144 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 FAM90A5PA8MXJ8 464 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 POC1B-GALNT4F8VUJ3 575 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 H3BNC9 293 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 SMIM22K7EJ46 135 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 IPO5O00410 1097 aaKnown RBP4.02□□□□□ -1.77
MALAT1-216ENST00000620465 LARGE1O95461 756 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 C1RP00736 705 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 MBPP02686 304 aaPredicted RBP4.02□□□□□ -1.77
MALAT1-216ENST00000620465 SLC3A2P08195 630 aaKnown RBP4.02□□□□□ -1.77
MALAT1-216ENST00000620465 CHRM5P08912 532 aaPredicted RBP4.02□□□□□ -1.77
MALAT1-216ENST00000620465 FAM90A15PP0C7V4 464 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 FAM90A14PP0C7W9 464 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 DUSP1P28562 367 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 THBS4P35443 961 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 WDR5P61964 334 aaKnown RBP4.02□□□□□ -1.77
MALAT1-216ENST00000620465 SF3A3Q12874 501 aaKnown RBP eCLIP4.02□□□□□ -1.77
MALAT1-216ENST00000620465 AAK1Q2M2I8 961 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 FBXO42Q6P3S6 717 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 ACSM6Q6P461 480 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 ADGRG3Q86Y34 549 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 GALNT4Q8N4A0 578 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 ADAMTS18Q8TE60 1221 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 HMGB4Q8WW32 186 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 CPT1BQ92523 772 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 NPIPB3Q92617 1050 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 RUBCNQ92622 972 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 REXO5Q96IC2 774 aaKnown RBP4.02□□□□□ -1.77
MALAT1-216ENST00000620465 CCDC17Q96LX7 622 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 SCLT1Q96NL6 688 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 CDCP1Q9H5V8 836 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 CCDC134Q9H6E4 229 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 ELAC1Q9H777 363 aaKnown RBP4.02□□□□□ -1.77
MALAT1-216ENST00000620465 SAYSD1Q9NPB0 183 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 ABHD10Q9NUJ1 306 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 VPS4AQ9UN37 437 aa4.02□□□□□ -1.77
MALAT1-216ENST00000620465 C19orf53Q9UNZ5 99 aaPredicted RBP4.02□□□□□ -1.77
MALAT1-216ENST00000620465 ZBTB1Q9Y2K1 713 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms