RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 GSDMBQ8TAX9 411 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 ETNPPLQ8TBG4 499 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 DCUN1D5Q9BTE7 237 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 FOXP3Q9BZS1 431 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 WNT8AQ9H1J5 351 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 XAB2Q9HCS7 855 aaKnown RBP10.7□□□□□ -0.7
VPS11-207ENST00000620429 RIC8BQ9NVN3 520 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 PI4KBQ9UBF8 816 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 ARIH1Q9Y4X5 557 aaPredicted RBP10.7□□□□□ -0.7
VPS11-207ENST00000620429 PCDHA1Q9Y5I3 950 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 CYP3A7-CYP3A51PA0A087WV96 503 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 DLATP10515 647 aaKnown RBP10.7□□□□□ -0.7
VPS11-207ENST00000620429 CYP3A7P24462 503 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 SLC1A1P43005 524 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 TCEAL1Q15170 157 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 GPATCH4Q5T3I0 446 aaKnown RBP10.7□□□□□ -0.7
VPS11-207ENST00000620429 PPP1R2P3Q6NXS1 205 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 SLC30A10Q6XR72 485 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 GPR141Q7Z602 305 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 CHERPQ8IWX8 916 aaKnown RBP10.7□□□□□ -0.7
VPS11-207ENST00000620429 RDH13Q8NBN7 331 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 SHKBP1Q8TBC3 707 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 HM13Q8TCT9 377 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 DPF3Q92784 378 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 BTBD6Q96KE9 485 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 C7orf26Q96N11 449 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 ZNF341Q9BYN7 854 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 SLC24A2Q9UI40 661 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 CPQQ9Y646 472 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 SIPA1L1O43166 1804 aa10.7□□□□□ -0.7
VPS11-207ENST00000620429 CLRN2A0PK11 232 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 H3BNH8 94 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 ARHGAP33O14559 1287 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 SCO2O43819 266 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 TRPA1O75762 1119 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 KRT6AP02538 564 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 KRT6BP04259 564 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 HSPA1AP0DMV8 641 aaKnown RBP10.69□□□□□ -0.7
VPS11-207ENST00000620429 HSPA1BP0DMV9 641 aaKnown RBP10.69□□□□□ -0.7
VPS11-207ENST00000620429 GAP43P17677 238 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 IFNA8P32881 189 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 MAN1A1P33908 653 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 NDST2P52849 883 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 CTBSQ01459 385 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 TUBA3CQ13748 450 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 CCDC58Q4VC31 144 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 WDR78Q5VTH9 848 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 XKR5Q6UX68 686 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 PRPF39Q86UA1 669 aaKnown RBP10.69□□□□□ -0.7
VPS11-207ENST00000620429 SLC51BQ86UW2 128 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 RAVER1Q8IY67 606 aaKnown RBP10.69□□□□□ -0.7
VPS11-207ENST00000620429 TNS4Q8IZW8 715 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 BBOF1Q8ND07 529 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 C1orf54Q8WWF1 131 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 ATP2A3Q93084 1043 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 WNK4Q96J92 1243 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 C9orf72Q96LT7 481 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 MBOAT7Q96N66 472 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 DHRS9Q9BPW9 319 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 IDI2Q9BXS1 227 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 SHCBP1LQ9BZQ2 653 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 RNF38Q9H0F5 515 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 GLT8D2Q9H1C3 349 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 UBE2TQ9NPD8 197 aaPredicted RBP10.69□□□□□ -0.7
VPS11-207ENST00000620429 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.69□□□□□ -0.7
VPS11-207ENST00000620429 SORCS3Q9UPU3 1222 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 POMPQ9Y244 141 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 WDR91A4D1P6 747 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 TCP10L2B9ZVM9 353 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 B4GALT4O60513 344 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 TSPAN1O60635 241 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 ATE1O95260 518 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 GH2P01242 217 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 PSMC3P17980 439 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 AOC1P19801 751 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 CXCR2P25025 360 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 MAGEA4P43358 317 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 PEX3P56589 373 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 ESRRGP62508 458 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 TXNL4AP83876 142 aaKnown RBP10.69□□□□□ -0.7
VPS11-207ENST00000620429 DGKDQ16760 1214 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 SGO2Q562F6 1265 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 SCARA3Q6AZY7 606 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 PPP4R4Q6NUP7 873 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 RINT1Q6NUQ1 792 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 CDAN1Q8IWY9 1227 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 OSCP1Q8WVF1 389 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 CCDC17Q96LX7 622 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 CCDC177Q9NQR7 707 aaPredicted RBP10.69□□□□□ -0.7
VPS11-207ENST00000620429 PPARGC1AQ9UBK2 798 aaKnown RBP10.69□□□□□ -0.7
VPS11-207ENST00000620429 CNOT11Q9UKZ1 510 aaKnown RBP10.69□□□□□ -0.7
VPS11-207ENST00000620429 ATP11BQ9Y2G3 1177 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 ANGPTL3Q9Y5C1 460 aa10.69□□□□□ -0.7
VPS11-207ENST00000620429 A0A1B0GTW7 788 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 A0A1W2PPM1 405 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 ILVBLA1L0T0 632 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 C2orf71A6NGG8 1288 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 SYCE1LA8MT33 242 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 F5H6K3 240 aa10.68□□□□□ -0.7
VPS11-207ENST00000620429 KLF11O14901 512 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms