RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 EFEMP1Q12805 493 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 PPP2R5DQ14738 602 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 PABPC1LQ4VXU2 614 aaKnown RBP15.76■□□□□ 0.11
CBWD1-225ENST00000616944 ZC3H12AQ5D1E8 599 aaKnown RBP15.76■□□□□ 0.11
CBWD1-225ENST00000616944 BRMS1LQ5PSV4 323 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 HECTD3Q5T447 861 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 MFSD7Q6UXD7 560 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 TMEM184AQ6ZMB5 413 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 VSIG1Q86XK7 387 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 HSPH1Q92598 858 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 RBM41Q96IZ5 413 aaKnown RBP15.76■□□□□ 0.11
CBWD1-225ENST00000616944 PRKD2Q9BZL6 878 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 NSUN3Q9H649 340 aaKnown RBP15.76■□□□□ 0.11
CBWD1-225ENST00000616944 ASAH2Q9NR71 780 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 TMPRSS4Q9NRS4 437 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 GPATCH2LQ9NWQ4 482 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 SMARCAL1Q9NZC9 954 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 DNMT3BQ9UBC3 853 aaKnown RBP15.76■□□□□ 0.11
CBWD1-225ENST00000616944 AP4E1Q9UPM8 1137 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 SPTBN5Q9NRC6 3674 aaKnown RBP15.76■□□□□ 0.11
CBWD1-225ENST00000616944 XIRP2A4UGR9 3374 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 LRRD1A4D1F6 860 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 KCNU1A8MYU2 1149 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 PI4K2BG5E9Z4 385 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 PGRMC1O00264 195 aaKnown RBP15.76■□□□□ 0.11
CBWD1-225ENST00000616944 IL4RP24394 825 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 CCR2P41597 374 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 HYAL1Q12794 435 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 SEMA3BQ13214 749 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 TRIP4Q15650 581 aaPredicted RBP15.76■□□□□ 0.11
CBWD1-225ENST00000616944 PPP2R5EQ16537 467 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 SEL1L2Q5TEA6 688 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 ELMSAN1Q6PJG2 1045 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 SPOCD1Q6ZMY3 1216 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 SND1Q7KZF4 910 aaKnown RBP eCLIP15.76■□□□□ 0.11
CBWD1-225ENST00000616944 TADA2BQ86TJ2 420 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 TSC1Q92574 1164 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 PPP2R3CQ969Q6 453 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 RNF25Q96BH1 459 aaPredicted RBP15.76■□□□□ 0.11
CBWD1-225ENST00000616944 FCRL2Q96LA5 508 aaPredicted RBP15.76■□□□□ 0.11
CBWD1-225ENST00000616944 CORO1BQ9BR76 489 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 MAGEB5Q9BZ81 275 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 WDCPQ9H6R7 721 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 PCDH18Q9HCL0 1135 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 LMCD1Q9NZU5 365 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 DNMT3LQ9UJW3 386 aa15.76■□□□□ 0.11
CBWD1-225ENST00000616944 DOCK8Q8NF50 2099 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 DENND4AQ7Z401 1863 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 hCG_1818297A0A087WSY0 165 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 ZNF487B1APH4 448 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 XYLBO75191 536 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 FGGP02679 453 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 PTPN2P17706 415 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 CDC25CP30307 473 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 L1CAMP32004 1257 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 CCR1P32246 355 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 ATP5C1P36542 298 aaKnown RBP15.75■□□□□ 0.11
CBWD1-225ENST00000616944 RING1Q06587 406 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 KLF1Q13351 362 aaPredicted RBP15.75■□□□□ 0.11
CBWD1-225ENST00000616944 DPYSL3Q14195 570 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 PDK2Q15119 407 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 TCEAL5Q5H9L2 206 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 ZDHHC14Q8IZN3 488 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 LEMD2Q8NC56 503 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 ZFRQ96KR1 1074 aaKnown RBP15.75■□□□□ 0.11
CBWD1-225ENST00000616944 RNF38Q9H0F5 515 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 TKTL2Q9H0I9 626 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 RASAL2Q9UJF2 1139 aa15.75■□□□□ 0.11
CBWD1-225ENST00000616944 HBS1LQ9Y450 684 aaKnown RBP15.75■□□□□ 0.11
CBWD1-225ENST00000616944 CCDC195A0A1B0GUA6 201 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 A0A1W2PRU2 124 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 MOSPD3O75425 235 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 FGF19O95750 216 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 RHOP08100 348 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 CDH6P55285 790 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 TBX4P57082 545 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 ITIH3Q06033 890 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 ADCY2Q08462 1091 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 SLC5A9Q2M3M2 681 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 TFDP3Q5H9I0 405 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 PRSS36Q5K4E3 855 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 ARTNQ5T4W7 220 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 ZNF697Q5TEC3 545 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 SLC13A5Q86YT5 568 aaPredicted RBP15.74■□□□□ 0.11
CBWD1-225ENST00000616944 MIB1Q86YT6 1006 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 CCDC50Q8IVM0 306 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 PYROXD2Q8N2H3 581 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 EFHBQ8N7U6 833 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 KCTD6Q8NC69 237 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 SHKBP1Q8TBC3 707 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 FAF2Q96CS3 445 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 SLC22A12Q96S37 553 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 KCTD15Q96SI1 283 aaPredicted RBP15.74■□□□□ 0.11
CBWD1-225ENST00000616944 ZNF670Q9BS34 389 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 OSBPL8Q9BZF1 889 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 PRDM12Q9H4Q4 367 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 SFXN1Q9H9B4 322 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 DZANK1Q9NVP4 752 aa15.74■□□□□ 0.11
CBWD1-225ENST00000616944 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.74■□□□□ 0.11
CBWD1-225ENST00000616944 EFR3BQ9Y2G0 817 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms