RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 VARSP26640 1264 aaKnown RBP13.55□□□□□ -0.24
FOXN3-219ENST00000615335 PTPN4P29074 926 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 POLR2BP30876 1174 aaKnown RBP13.55□□□□□ -0.24
FOXN3-219ENST00000615335 MTTPP55157 894 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 FAM189BP81408 668 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 IKBKEQ14164 716 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 RCN1Q15293 331 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 MAP7D1Q3KQU3 841 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 SGO2Q562F6 1265 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 C4orf50Q6ZRC1 276 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 SPATA31D4Q6ZUB0 917 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 ZNF598Q86UK7 904 aaKnown RBP13.55□□□□□ -0.24
FOXN3-219ENST00000615335 ALDH16A1Q8IZ83 802 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 GSTCDQ8NEC7 633 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 C1orf54Q8WWF1 131 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 DDX1Q92499 740 aaKnown RBP13.55□□□□□ -0.24
FOXN3-219ENST00000615335 SLCO2A1Q92959 643 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 NACA2Q9H009 215 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 WHRNQ9P202 907 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 STX18Q9P2W9 335 aaKnown RBP13.55□□□□□ -0.24
FOXN3-219ENST00000615335 SIX4Q9UIU6 781 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 PCDHB7Q9Y5E2 793 aa13.55□□□□□ -0.24
FOXN3-219ENST00000615335 KRT5P13647 590 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 ACADVLP49748 655 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 SCNN1GP51170 649 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 KRT17Q04695 432 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 RNASELQ05823 741 aaKnown RBP13.54□□□□□ -0.24
FOXN3-219ENST00000615335 MGAT5Q09328 741 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 LLGL1Q15334 1064 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 CLEC16AQ2KHT3 1053 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 ZNF699Q32M78 642 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 GRAMD4Q6IC98 578 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 DUS1LQ6P1R4 473 aaKnown RBP13.54□□□□□ -0.24
FOXN3-219ENST00000615335 CNKSR3Q6P9H4 555 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 TMEM110Q86TL2 294 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 PDCD7Q8N8D1 485 aaKnown RBP13.54□□□□□ -0.24
FOXN3-219ENST00000615335 GOLGA2P5Q9HBQ8 144 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 TMEM161AQ9NX61 479 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 MIOSQ9NXC5 875 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 ANAPC7Q9UJX3 599 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 ALPK3Q96L96 1907 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 CCDC85CA6NKD9 419 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 ASS1P00966 412 aaKnown RBP13.54□□□□□ -0.24
FOXN3-219ENST00000615335 POMCP01189 267 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 FGFR1P11362 822 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 EPHB2P29323 1055 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 HDAC4P56524 1084 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 NOP14P78316 857 aaKnown RBP13.54□□□□□ -0.24
FOXN3-219ENST00000615335 RBP5P82980 135 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 SPIDRQ14159 915 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.54□□□□□ -0.24
FOXN3-219ENST00000615335 GLB1LQ6UWU2 654 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 C7orf61Q8IZ16 206 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 MAGEB18Q96M61 343 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 PPP1R10Q96QC0 940 aaKnown RBP13.54□□□□□ -0.24
FOXN3-219ENST00000615335 LRRC37BQ96QE4 947 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 SIKE1Q9BRV8 207 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 CDC42EP4Q9H3Q1 356 aaKnown RBP13.54□□□□□ -0.24
FOXN3-219ENST00000615335 SLC38A7Q9NVC3 462 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 ASIC3Q9UHC3 531 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 LNPEPQ9UIQ6 1025 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 HAO1Q9UJM8 370 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 LRFN2Q9ULH4 789 aa13.54□□□□□ -0.24
FOXN3-219ENST00000615335 HTR3EA5X5Y0 456 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 ITIH2P19823 946 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 TARSP26639 723 aaKnown RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 WDR72Q3MJ13 1102 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 CXorf38Q8TB03 319 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 NRG4Q8WWG1 115 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 SLC7A6OSQ96CW6 309 aaPredicted RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 ERP27Q96DN0 273 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 HPDLQ96IR7 371 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 TGS1Q96RS0 853 aaKnown RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 SYNCQ9H7C4 482 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 APOBEC3GQ9HC16 384 aaKnown RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 CROTQ9UKG9 612 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 TTC3P53804 2025 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 TDRD15B5MCY1 1934 aaKnown RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 CAPN9O14815 690 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 ZCCHC18P0CG32 403 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 ETS2P15036 469 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 CYP3A5P20815 502 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 DCTN2Q13561 401 aaKnown RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 KHDC1Q4VXA5 237 aaKnown RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 TMEM53Q6P2H8 277 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 SYDE1Q6ZW31 735 aaPredicted RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 DQX1Q8TE96 717 aaKnown RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 STMN2Q93045 179 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 VWCEQ96DN2 955 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 HTATIP2Q9BUP3 242 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 XYLT2Q9H1B5 865 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 ELAC1Q9H777 363 aaKnown RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 NXF1Q9UBU9 619 aaKnown RBP13.53□□□□□ -0.24
FOXN3-219ENST00000615335 MICAL3Q7RTP6 2002 aa13.53□□□□□ -0.24
FOXN3-219ENST00000615335 SCN1AP35498 2009 aa13.52□□□□□ -0.24
FOXN3-219ENST00000615335 PSMG1O95456 288 aa13.52□□□□□ -0.24
FOXN3-219ENST00000615335 ACSL3O95573 720 aa13.52□□□□□ -0.24
FOXN3-219ENST00000615335 ACRP10323 421 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms