RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 FYNP06241 537 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 CSH1P0DML2 217 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 CSH2P0DML3 217 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 YWHAQP27348 245 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 ALDH1A3P47895 512 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 PSEN1P49768 467 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 RNASE9P60153 205 aaKnown RBP11.92□□□□□ -0.5
SLIRP-212ENST00000613856 PUM1Q14671 1186 aaKnown RBP eCLIP11.92□□□□□ -0.55e-7■■■□□ 19
SLIRP-212ENST00000613856 VEPH1Q14D04 833 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 RSPO4Q2I0M5 234 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-212ENST00000613856 SLC25A52Q3SY17 297 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 SDHAF4Q5VUM1 108 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 CC2D1AQ6P1N0 951 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-212ENST00000613856 POLNQ7Z5Q5 900 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 MON1AQ86VX9 555 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 CPNE8Q86YQ8 564 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 RHOT1Q8IXI2 618 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 MAML2Q8IZL2 1156 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-212ENST00000613856 DEFB106AQ8N104 65 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 OVCA2Q8WZ82 227 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 NDRG1Q92597 394 aaKnown RBP11.92□□□□□ -0.5
SLIRP-212ENST00000613856 PGAP3Q96FM1 320 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-212ENST00000613856 TRMT2BQ96GJ1 504 aaKnown RBP11.92□□□□□ -0.5
SLIRP-212ENST00000613856 MYRFLQ96LU7 910 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 CFAP57Q96MR6 1250 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 MYADMQ96S97 322 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 OSBPL9Q96SU4 736 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 NPY6RQ99463 290 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 CARD9Q9H257 536 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 L2HGDHQ9H9P8 463 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 TMEM51Q9NW97 253 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 PACSIN2Q9UNF0 486 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-212ENST00000613856 PCDHA3Q9Y5H8 950 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 MRFAP1Q9Y605 127 aa11.92□□□□□ -0.5
SLIRP-212ENST00000613856 MAP1BP46821 2468 aaKnown RBP11.92□□□□□ -0.5
SLIRP-212ENST00000613856 PRRG1O14668 218 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 URI1O94763 535 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-212ENST00000613856 ENDOD1O94919 500 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 ZDHHC11BP0C7U3 371 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 SP9P0CG40 484 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 KLRC2P26717 231 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 PEX5P50542 639 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 CLCN4P51793 760 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 TAS2R40P59535 323 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 YWHAGP61981 247 aaKnown RBP eCLIP11.91□□□□□ -0.5
SLIRP-212ENST00000613856 USP46P62068 366 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 SLC25A11Q02978 314 aaKnown RBP11.91□□□□□ -0.5
SLIRP-212ENST00000613856 HADHQ16836 314 aaKnown RBP11.91□□□□□ -0.5
SLIRP-212ENST00000613856 C15orf59Q2T9L4 293 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-212ENST00000613856 OTUD1Q5VV17 481 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-212ENST00000613856 BSPRYQ5W0U4 402 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 MSANTD2Q6P1R3 559 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 SCD5Q86SK9 330 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 KATNAL2Q8IYT4 538 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 ARFGAP1Q8N6T3 406 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 SUMF1Q8NBK3 374 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 PDZD8Q8NEN9 1154 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 GPR152Q8TDT2 470 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 FAM172AQ8WUF8 416 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 HDAC7Q8WUI4 952 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 ALG3Q92685 438 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 KRT35Q92764 455 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 FBXO32Q969P5 355 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 PBKQ96KB5 322 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 FOXQ1Q9C009 403 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 SFXN1Q9H9B4 322 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 ABCC13Q9NSE7 274 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 CLIC5Q9NZA1 410 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 CDC23Q9UJX2 597 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.91□□□□□ -0.5
SLIRP-212ENST00000613856 ASB3Q9Y575 518 aa11.91□□□□□ -0.5
SLIRP-212ENST00000613856 KCNK3O14649 394 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 CAPN9O14815 690 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 RFPL2O75678 378 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 IGLV3-25P01717 112 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 KRT7P08729 469 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 HMGA1P17096 107 aaKnown RBP11.9□□□□□ -0.5
SLIRP-212ENST00000613856 MIPP30301 263 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 HOXA9P31269 272 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 RDXP35241 583 aaKnown RBP11.9□□□□□ -0.5
SLIRP-212ENST00000613856 MARCKSL1P49006 195 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 SULT1E1P49888 294 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 EPHB3P54753 998 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 HDAC4P56524 1084 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 RWDD2BP57060 319 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 TWF1Q12792 350 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 IFRD2Q12894 506 aaPredicted RBP11.9□□□□□ -0.5
SLIRP-212ENST00000613856 WHAMMP3Q1A5X7 153 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 DCAF6Q58WW2 860 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 DCAF12L1Q5VU92 463 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 SNX30Q5VWJ9 437 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 BTBD8Q5XKL5 378 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 OTOP3Q7RTS5 596 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 ITIH5Q86UX2 942 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 SLC44A3Q8N4M1 653 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 ZNF276Q8N554 614 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 STKLD1Q8NE28 680 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 GIPC2Q8TF65 315 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 PSMG2Q969U7 264 aa11.9□□□□□ -0.5
SLIRP-212ENST00000613856 ACSF2Q96CM8 615 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms