RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 GZMAP12544 262 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 SLC1A6P48664 564 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 SNAP25P60880 206 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 AUHQ13825 339 aaKnown RBP7.06□□□□□ -1.28
CLCN3-211ENST00000613795 RBM20Q5T481 1227 aaKnown RBP7.06□□□□□ -1.28
CLCN3-211ENST00000613795 TTC23Q5W5X9 447 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 DENND5AQ6IQ26 1287 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 RNF135Q8IUD6 432 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 IQCKQ8N0W5 287 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 TSPAN18Q96SJ8 248 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 PACSIN1Q9BY11 444 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 UBE2OQ9C0C9 1292 aaKnown RBP7.06□□□□□ -1.28
CLCN3-211ENST00000613795 ZNF518BQ9C0D4 1074 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 SPON1Q9HCB6 807 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 TMEM161AQ9NX61 479 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 ERAP1Q9NZ08 941 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 ENOPH1Q9UHY7 261 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 AXIN2Q9Y2T1 843 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 SPEF1Q9Y4P9 236 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 CEMIPQ8WUJ3 1361 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 ZSCAN5CA6NGD5 496 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-211ENST00000613795 PDLIM1O00151 329 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 TDP2O95551 362 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 MAGEA10P43363 369 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-211ENST00000613795 RPL21P46778 160 aaKnown RBP7.06□□□□□ -1.28
CLCN3-211ENST00000613795 AMPD2Q01433 879 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 DGKDQ16760 1214 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 SCARA3Q6AZY7 606 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 ACAD10Q6JQN1 1059 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 PID1Q7Z2X4 250 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 FAM9CQ8IZT9 166 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 GMCL1P1Q8NEA9 526 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 SCFD2Q8WU76 684 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 ELMO2Q96JJ3 720 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 KLHL32Q96NJ5 620 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 THAP2Q9H0W7 228 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 DHX35Q9H5Z1 703 aaKnown RBP7.06□□□□□ -1.28
CLCN3-211ENST00000613795 POLR1BQ9H9Y6 1135 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 IL1RL2Q9HB29 575 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 H2AFY2Q9P0M6 372 aaPredicted RBP7.06□□□□□ -1.28
CLCN3-211ENST00000613795 DSEQ9UL01 958 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 PRPF19Q9UMS4 504 aaKnown RBP7.06□□□□□ -1.28
CLCN3-211ENST00000613795 SLC12A4Q9UP95 1085 aa7.06□□□□□ -1.28
CLCN3-211ENST00000613795 SPATA31A5Q5VU36 1347 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 SPATA31A7Q8IWB4 1347 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 NTSR2O95665 410 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PENKP01210 267 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-211ENST00000613795 SLC4A1P02730 911 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 CPB1P15086 417 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ST8SIA6P61647 398 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 USP4Q13107 963 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PRKAA1Q13131 559 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PTK6Q13882 451 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 CCDC157Q569K6 752 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 EID3Q8N140 333 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLCN3-211ENST00000613795 FAM45AQ8TCE6 357 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PROX1Q92786 737 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 MTMR8Q96EF0 704 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ATXN7L3BQ96GX2 97 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 CDK5RAP1Q96SZ6 601 aaKnown RBP7.05□□□□□ -1.28
CLCN3-211ENST00000613795 KCTD14Q9BQ13 255 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PIDD1Q9HB75 910 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 FAM53CQ9NYF3 392 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PCDHGC5Q9Y5F6 944 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 MYMKA6NI61 221 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 MEI4A8MW99 385 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 MAGEC1O60732 1142 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 CCNKO75909 580 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ITGA4P13612 1032 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 CPA3P15088 417 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 RXRGP48443 463 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 FKBP1AP62942 108 aaKnown RBP7.05□□□□□ -1.28
CLCN3-211ENST00000613795 GRIK3Q13003 919 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 TTC30AQ86WT1 665 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 VPS37AQ8NEZ2 397 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 DIS3LQ8TF46 1054 aaKnown RBP7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PLEKHA8Q96JA3 519 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PLK2Q9NYY3 685 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 KIF20BQ96Q89 1820 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ERCC6L2Q5T890 1561 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 BTNL10A8MVZ5 291 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 E9PBE3 544 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PROCP04070 461 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 HIST1H2AGP0C0S8 130 aaPredicted RBP7.05□□□□□ -1.28
CLCN3-211ENST00000613795 STAG3L1P0CL83 205 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 HIST1H2ADP20671 130 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ATP6V1B2P21281 511 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 GUCY1A2P33402 732 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 GTF2A2P52657 109 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PUDPQ08623 228 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 NFYCQ13952 458 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 QPCTQ16769 361 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 FAM83EQ2M2I3 478 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 PRR5LQ6MZQ0 368 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 NOTUMQ6P988 496 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 LRRC49Q8IUZ0 686 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 ATPAF2Q8N5M1 289 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 RNF149Q8NC42 400 aa7.05□□□□□ -1.28
CLCN3-211ENST00000613795 GPRC5AQ8NFJ5 357 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms