RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 LHX5Q9H2C1 402 aa18.22■□□□□ 0.51
CHMP4A-211ENST00000609024 NMUR1Q9HB89 426 aa18.22■□□□□ 0.51
CHMP4A-211ENST00000609024 TOR4AQ9NXH8 423 aa18.22■□□□□ 0.51
CHMP4A-211ENST00000609024 FTSJ1Q9UET6 329 aa18.22■□□□□ 0.51
CHMP4A-211ENST00000609024 SNX11Q9Y5W9 270 aa18.22■□□□□ 0.51
CHMP4A-211ENST00000609024 URB1O60287 2271 aaKnown RBP18.22■□□□□ 0.51
CHMP4A-211ENST00000609024 A0A087WV48 116 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 LRRIQ3A6PVS8 624 aaPredicted RBP18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 E9PAM4 449 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 PENKP01210 267 aaPredicted RBP18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 IGLV3-19P01714 112 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 BNC1Q01954 994 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 EFEMP1Q12805 493 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 FYB2Q5VWT5 728 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 CLEC20AQ6ZU45 233 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 UNC13DQ70J99 1090 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 RSRC2Q7L4I2 434 aaKnown RBP18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 GPRIN1Q7Z2K8 1008 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 C12orf56Q8IXR9 622 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 OR2T3Q8NH03 318 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 PIP4K2CQ8TBX8 421 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 ELMO3Q96BJ8 720 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 CYFIP2Q96F07 1278 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 USP28Q96RU2 1077 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 IMPG2Q9BZV3 1241 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 PNPLA8Q9NP80 782 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 SLC39A2Q9NP94 309 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 STRIP2Q9ULQ0 834 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 PLA2G4CQ9UP65 541 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 BTBD3Q9Y2F9 522 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 ANKRD6Q9Y2G4 727 aa18.21■□□□□ 0.51
CHMP4A-211ENST00000609024 ZIC2O95409 532 aaPredicted RBP18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 C4BPAP04003 597 aaKnown RBP18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 DNTTP04053 509 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 CORO1AP31146 461 aaKnown RBP18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 HNF1BP35680 557 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 COPAP53621 1224 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 C21orf59P57076 290 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 ENPP2Q13822 863 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 KNOP1Q1ED39 458 aaKnown RBP18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 FNDC3BQ53EP0 1204 aaKnown RBP18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 DENND1CQ8IV53 801 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 PARD3BQ8TEW8 1205 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 IGSF8Q969P0 613 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 SKA1Q96BD8 255 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 NXPE2Q96DL1 559 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 HNRNPABQ99729 332 aaKnown RBP18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 C7orf25Q9BPX7 421 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 SLC2A11Q9BYW1 496 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 BTBD1Q9H0C5 482 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 CLIC5Q9NZA1 410 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 HMGXB4Q9UGU5 601 aa18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 MORC2Q9Y6X9 1032 aaPredicted RBP18.2■□□□□ 0.5
CHMP4A-211ENST00000609024 DFNA5O60443 496 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 DKK1O94907 266 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 FSBPO95073 299 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 JUPP14923 745 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 PRKCHP24723 683 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 PIK3CAP42336 1068 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 GRIA4P48058 902 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 BCAT1P54687 386 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 SMAD1Q15797 465 aaKnown RBP18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 C6orf118Q5T5N4 469 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 DHRS13Q6UX07 377 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 ARHGAP18Q8N392 663 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 CCDC150Q8NCX0 1101 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 SORCS1Q8WY21 1168 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 NT5C1AQ9BXI3 368 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 ZSCAN16Q9H4T2 348 aaPredicted RBP18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 C6orf106Q9H6K1 298 aaPredicted RBP18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 MAGEF1Q9HAY2 307 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 TM9SF3Q9HD45 589 aa18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 AGO1Q9UL18 857 aaKnown RBP18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.19■□□□□ 0.5
CHMP4A-211ENST00000609024 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 KCNK3O14649 394 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 RRP8O43159 456 aaKnown RBP18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 PCDHGA12O60330 932 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 SEMA4FO95754 770 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 KLKB1P03952 638 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 SYT1P21579 422 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 ACSL1P33121 698 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 KIF11P52732 1056 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 E2F4Q16254 413 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 TTC31Q49AM3 519 aaPredicted RBP18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 CCDC186Q7Z3E2 898 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 TMPRSS12Q86WS5 348 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 ZNF276Q8N554 614 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 GANCQ8TET4 914 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 SLC39A7Q92504 469 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 PIWIL1Q96J94 861 aaKnown RBP18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 GZF1Q9H116 711 aaPredicted RBP18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 OSGEPQ9NPF4 335 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 NCKAP1Q9Y2A7 1128 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 AK5Q9Y6K8 562 aa18.18■□□□□ 0.5
CHMP4A-211ENST00000609024 GOLGA4Q13439 2230 aaKnown RBP18.17■□□□□ 0.5
CHMP4A-211ENST00000609024 SLC12A8A0AV02 714 aa18.17■□□□□ 0.5
CHMP4A-211ENST00000609024 TK2O00142 265 aa18.17■□□□□ 0.5
CHMP4A-211ENST00000609024 SPTLC2O15270 562 aa18.17■□□□□ 0.5
CHMP4A-211ENST00000609024 VNN1O95497 513 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms