RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 FCRL2Q96LA5 508 aaPredicted RBP8□□□□□ -1.13
MSH6-211ENST00000606499 ASB16Q96NS5 453 aa8□□□□□ -1.13
MSH6-211ENST00000606499 KLF16Q9BXK1 252 aaPredicted RBP8□□□□□ -1.13
MSH6-211ENST00000606499 TMPRSS4Q9NRS4 437 aa8□□□□□ -1.13
MSH6-211ENST00000606499 TDP1Q9NUW8 608 aa8□□□□□ -1.13
MSH6-211ENST00000606499 TRMT1Q9NXH9 659 aaKnown RBP8□□□□□ -1.13
MSH6-211ENST00000606499 RRN3Q9NYV6 651 aa8□□□□□ -1.13
MSH6-211ENST00000606499 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8□□□□□ -1.133e-10■■■■■ 28.1
MSH6-211ENST00000606499 GDE1Q9NZC3 331 aa8□□□□□ -1.13
MSH6-211ENST00000606499 CFAP97Q9P2B7 532 aa8□□□□□ -1.13
MSH6-211ENST00000606499 IP6K2Q9UHH9 426 aa8□□□□□ -1.13
MSH6-211ENST00000606499 GUCA1BQ9UMX6 200 aa8□□□□□ -1.13
MSH6-211ENST00000606499 ARHGAP26Q9UNA1 814 aa8□□□□□ -1.13
MSH6-211ENST00000606499 USTQ9Y2C2 406 aa8□□□□□ -1.13
MSH6-211ENST00000606499 TLR6Q9Y2C9 796 aa8□□□□□ -1.13
MSH6-211ENST00000606499 HYOU1Q9Y4L1 999 aa8□□□□□ -1.13
MSH6-211ENST00000606499 CAPN6Q9Y6Q1 641 aa8□□□□□ -1.13
MSH6-211ENST00000606499 TICRRQ7Z2Z1 1910 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 GRID2IPA4D2P6 1211 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 SOBPA7XYQ1 873 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 I6L893 689 aaPredicted RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 MYO1FO00160 1098 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 LEFTY2O00292 366 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 ZSCAN12O43309 604 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 KRT86O43790 486 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 PROSCO94903 275 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 ENDOD1O94919 500 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 MOCS2O96007 188 aaPredicted RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 PFKLP17858 780 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 CORO1AP31146 461 aaKnown RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 GGCXP38435 758 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 CXCR3P49682 368 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 NAP1L1P55209 391 aaKnown RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 NNTQ13423 1086 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 EIF4EBP2Q13542 120 aaPredicted RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 ZNF77Q15935 545 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 ARHGAP29Q52LW3 1261 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 ZC3H12AQ5D1E8 599 aaKnown RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 TANGO2Q6ICL3 276 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 SCYL2Q6P3W7 929 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 PARM1Q6UWI2 310 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 CYP4V2Q6ZWL3 525 aaPredicted RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 STRADAQ7RTN6 431 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 OTOP3Q7RTS5 596 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 CCAR2Q8N163 923 aaKnown RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 CCDC185Q8N715 623 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 NIPA2Q8N8Q9 360 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 TDRD5Q8NAT2 981 aaKnown RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 TPCN2Q8NHX9 752 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 FGF14Q92915 247 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 RNF34Q969K3 372 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 ACSF2Q96CM8 615 aaPredicted RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 SLC39A13Q96H72 371 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 RPGRIP1Q96KN7 1286 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 LRRC3BQ96PB8 259 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 PEBP4Q96S96 227 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 KXD1Q9BQD3 176 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 PHF7Q9BWX1 381 aaPredicted RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 IRX2Q9BZI1 471 aaPredicted RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 TSGA10Q9BZW7 698 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 ANLNQ9NQW6 1124 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 PCSK1NQ9UHG2 260 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 ZMYM5Q9UJ78 669 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 HBS1LQ9Y450 684 aaKnown RBP7.99□□□□□ -1.13
MSH6-211ENST00000606499 KIAA1549LQ6ZVL6 1849 aa7.99□□□□□ -1.13
MSH6-211ENST00000606499 MUC3AQ02505 3323 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 HEPACAM2A8MVW5 462 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 GREM1O60565 184 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 PALMO75781 387 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 RNF8O76064 485 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 F9P00740 461 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 APOEP02649 317 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 KLKB1P03952 638 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 DESP17661 470 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 WEE1P30291 646 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 MIPP30301 263 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 CCR1P32246 355 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 GBP1P32455 592 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 MAN1A1P33908 653 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 DEKP35659 375 aaKnown RBP7.98□□□□□ -1.13
MSH6-211ENST00000606499 GJC1P36383 396 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 SSR1P43307 286 aaKnown RBP7.98□□□□□ -1.13
MSH6-211ENST00000606499 TAS2R40P59535 323 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 COG7P83436 770 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 SLC25A11Q02978 314 aaKnown RBP7.98□□□□□ -1.13
MSH6-211ENST00000606499 RING1Q06587 406 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 HTR4Q13639 388 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 PIGHQ14442 188 aaPredicted RBP7.98□□□□□ -1.13
MSH6-211ENST00000606499 PPP2R5DQ14738 602 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 PUS10Q3MIT2 529 aaKnown RBP7.98□□□□□ -1.13
MSH6-211ENST00000606499 TXNRD3NBQ6F5E7 133 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 C11orf63Q6NUN7 778 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 CC2D1AQ6P1N0 951 aaPredicted RBP7.98□□□□□ -1.13
MSH6-211ENST00000606499 VITQ6UXI7 678 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 ZNF662Q6ZS27 426 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 SND1Q7KZF4 910 aaKnown RBP eCLIP7.98□□□□□ -1.13
MSH6-211ENST00000606499 DAAM2Q86T65 1068 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 BBS7Q8IWZ6 715 aa7.98□□□□□ -1.13
MSH6-211ENST00000606499 CELF5Q8N6W0 485 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms