RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ANPEPP15144 967 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 PTK6Q13882 451 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 KCTD19Q17RG1 926 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 NIF3L1Q9GZT8 377 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 CATSPERBQ9H7T0 1116 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 WHRNQ9P202 907 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 TRIM17Q9Y577 477 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 PCDHB2Q9Y5E7 798 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 NR1H2P55055 460 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 CENPCQ03188 943 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 C10orf120Q5SQS8 335 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 TMPRSS6Q8IU80 811 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 FAM136AQ96C01 138 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 NAGPAQ9UK23 515 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 ATXN2Q99700 1313 aaKnown RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 ZMPSTE24O75844 475 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 ZBTB11O95625 1053 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 DRD4P21917 467 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 RABL6Q3YEC7 729 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 KLHDC7AQ5VTJ3 777 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 TMC3Q7Z5M5 1100 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 UBA3Q8TBC4 463 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 COPS4Q9BT78 406 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 RUSC1Q9BVN2 902 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 SEMA4AQ9H3S1 761 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 LSM7Q9UK45 103 aaKnown RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 DAGLAQ9Y4D2 1042 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 ALG6Q9Y672 507 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 SMIM31A0A1B0GVY4 71 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 FCGR1AP12314 374 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 CCNFP41002 786 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 COPZ1P61923 177 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 KCNV1Q6PIU1 500 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 CRELD2Q6UXH1 353 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 OTOAQ7RTW8 1153 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 C1orf131Q8NDD1 294 aaKnown RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 OR7A2PQ8NGA2 310 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 CINPQ9BW66 212 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 PRRG3Q9BZD7 231 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 AXIN2Q9Y2T1 843 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 PPP2R3BQ9Y5P8 575 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 AK5Q9Y6K8 562 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 ALDH1A1P00352 501 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 ITGA4P13612 1032 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 IKBIPQ70UQ0 350 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 TATDN2Q93075 761 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 PPP1R2P1Q96PQ5 205 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 SMARCAD1Q9H4L7 1026 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 WWOXQ9NZC7 414 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 EVPLLA8MZ36 301 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 CLCN2P51788 898 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 PHC1P78364 1004 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 VAC14Q08AM6 782 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 ORC1Q13415 861 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 SNX32Q86XE0 403 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 LACRTQ9GZZ8 138 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 DUSP12Q9UNI6 340 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 EIF3DO15371 548 aaKnown RBP eCLIP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 TUBA1BP68363 451 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 BAATQ14032 418 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 CNPY1Q3B7I2 92 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 TUBA1AQ71U36 451 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 VN1R5Q7Z5H4 357 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 YTHDF3Q7Z739 585 aaKnown RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 AMIGO2Q86SJ2 522 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 OVOS2A0A0G2JMS6 1433 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 OVOS2A0A0J9YW53 1432 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 OVOS2Q6IE36 1432 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 ITGA3P26006 1051 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 ZIK1Q3SY52 487 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-216ENST00000602557 SEL1L3Q68CR1 1132 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 STX12Q86Y82 276 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 BLOC1S5Q8TDH9 187 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 TAMM41Q96BW9 452 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 CYP4F12Q9HCS2 524 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 RIC8BQ9NVN3 520 aa8.92□□□□□ -0.98
CSMD1-216ENST00000602557 EPB42P16452 691 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 CCDC153Q494R4 210 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 LINC00523Q86TU6 105 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 SLC30A1Q9Y6M5 507 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 CCNKO75909 580 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 HK2P52789 917 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 TTC7BQ86TV6 843 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 ATG16L2Q8NAA4 619 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 SEMA4DQ92854 862 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 SLC38A7Q9NVC3 462 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 DMTF1Q9Y222 760 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 RPS6KL1Q9Y6S9 549 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 CNTNAP5Q8WYK1 1306 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 C15orf38-AP3S2A0A0A6YYH1 394 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 A0A1W2PQJ5 194 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 NPTXRO95502 500 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 ARL4DP49703 201 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 STILQ15468 1287 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 XKR3Q5GH77 459 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 ARPINQ7Z6K5 226 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 RNF112Q9ULX5 631 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 RABL2BQ9UNT1 228 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 PXDNLA1KZ92 1463 aa8.91□□□□□ -0.98
CSMD1-216ENST00000602557 PTGER2P43116 358 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms