RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 DAOAP59103 153 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 PPM1JQ5JR12 505 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 PMF1Q6P1K2 205 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 SLC36A4Q6YBV0 504 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 FMNL3Q8IVF7 1028 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 RBBP8NLQ8NC74 664 aaPredicted RBP16.52■□□□□ 0.24
VRK3-221ENST00000600284 IPO4Q8TEX9 1081 aaKnown RBP16.52■□□□□ 0.24
VRK3-221ENST00000600284 UCMAQ8WVF2 138 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 NDRG1Q92597 394 aaKnown RBP16.52■□□□□ 0.24
VRK3-221ENST00000600284 KAT5Q92993 513 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 BHMTQ93088 406 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 ACOX2Q99424 681 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 SMOC1Q9H4F8 434 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 RWDD2AQ9UIY3 292 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 CNTN6Q9UQ52 1028 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 ABCA7Q8IZY2 2146 aa16.52■□□□□ 0.23
VRK3-221ENST00000600284 AP5Z1O43299 807 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 TIMM44O43615 452 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 FBXO21O94952 628 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 LCP1P13796 627 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 WASP42768 502 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 MFAP3P55082 362 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 MEA1Q16626 185 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 MPPE1Q53F39 396 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 RNF43Q68DV7 783 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 SMYD5Q6GMV2 418 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 MSANTD2Q6P1R3 559 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 RRAGAQ7L523 313 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 ARHGEF19Q8IW93 802 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 P2RY11Q96G91 374 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 PIWIL1Q96J94 861 aaKnown RBP16.51■□□□□ 0.23
VRK3-221ENST00000600284 FAM81BQ96LP2 452 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 ZSWIM1Q9BR11 485 aa16.51■□□□□ 0.23
VRK3-221ENST00000600284 IRX2Q9BZI1 471 aaPredicted RBP16.51■□□□□ 0.23
VRK3-221ENST00000600284 EVLQ9UI08 416 aaPredicted RBP16.51■□□□□ 0.23
VRK3-221ENST00000600284 MBD1Q9UIS9 605 aaPredicted RBP16.51■□□□□ 0.23
VRK3-221ENST00000600284 M0QYV0 167 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 GABBR2O75899 941 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 ADRB1P08588 477 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 BRD2P25440 801 aaKnown RBP16.5■□□□□ 0.23
VRK3-221ENST00000600284 HOXD12P35452 270 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 RPL34P49207 117 aaKnown RBP16.5■□□□□ 0.23
VRK3-221ENST00000600284 ENPP2Q13822 863 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 EIF4HQ15056 248 aaKnown RBP16.5■□□□□ 0.23
VRK3-221ENST00000600284 TCEAL6Q6IPX3 200 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 ENOSF1Q7L5Y1 443 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 ANKS1BQ7Z6G8 1248 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 METTL3Q86U44 580 aaKnown RBP16.5■□□□□ 0.23
VRK3-221ENST00000600284 SYT12Q8IV01 421 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 FRMD1Q8N878 549 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 DDI1Q8WTU0 396 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 EDEM1Q92611 657 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 GOLGA1Q92805 767 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 TCEAL3Q969E4 200 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 EDEM2Q9BV94 578 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 LSM14BQ9BX40 385 aaKnown RBP16.5■□□□□ 0.23
VRK3-221ENST00000600284 INTS2Q9H0H0 1204 aaKnown RBP16.5■□□□□ 0.23
VRK3-221ENST00000600284 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 CALCOCO1Q9P1Z2 691 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 THAP10Q9P2Z0 257 aaPredicted RBP16.5■□□□□ 0.23
VRK3-221ENST00000600284 SFMBT1Q9UHJ3 866 aa16.5■□□□□ 0.23
VRK3-221ENST00000600284 THADAQ6YHU6 1953 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 LTFP02788 710 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 NDUFV2P19404 249 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 RGS7P49802 495 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 GEN1Q17RS7 908 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 ADGRF1Q5T601 910 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 KIAA1211LQ6NV74 962 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 UNC45BQ8IWX7 931 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 TMEFF1Q8IYR6 380 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 PIGKQ92643 395 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 AZIN2Q96A70 460 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 TMA16Q96EY4 203 aaKnown RBP16.49■□□□□ 0.23
VRK3-221ENST00000600284 KREMEN1Q96MU8 473 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 UBE2TQ9NPD8 197 aaPredicted RBP16.49■□□□□ 0.23
VRK3-221ENST00000600284 ELOVL2Q9NXB9 296 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 CACNA2D2Q9NY47 1150 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 STON1Q9Y6Q2 735 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 PLXND1Q9Y4D7 1925 aa16.49■□□□□ 0.23
VRK3-221ENST00000600284 LNP1A1A4G5 178 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 SART1O43290 800 aaKnown RBP16.48■□□□□ 0.23
VRK3-221ENST00000600284 MED7O43513 233 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 PTGER3P43115 390 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 GPD2P43304 727 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 ACADSBP45954 432 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 RPL6Q02878 288 aaKnown RBP16.48■□□□□ 0.23
VRK3-221ENST00000600284 RING1Q06587 406 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 LMAN2Q12907 356 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 STARD3Q14849 445 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 CAMK4Q16566 473 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 MPP7Q5T2T1 576 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 DAB2IPQ5VWQ8 1189 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 PEAR1Q5VY43 1037 aaPredicted RBP16.48■□□□□ 0.23
VRK3-221ENST00000600284 LYSMD4Q5XG99 296 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 NUGGCQ68CJ6 796 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 MLKLQ8NB16 471 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 STK32AQ8WU08 396 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 MRGPRX1Q96LB2 322 aa16.48■□□□□ 0.23
VRK3-221ENST00000600284 NUP205Q92621 2012 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms