RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 RSAD2Q8WXG1 361 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 ERP27Q96DN0 273 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 RSAD1Q9HA92 442 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 KCNK9Q9NPC2 374 aa17.69■□□□□ 0.42
SHKBP1-205ENST00000594973 GOLGA8MH3BSY2 632 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 CHRNA1P02708 482 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 TKTP29401 623 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 EIF3EP60228 445 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 USP4Q13107 963 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 DPYSL3Q14195 570 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 RSPH3Q86UC2 560 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 ZC3H18Q86VM9 953 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 ANKRD42Q8N9B4 389 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 TTC8Q8TAM2 541 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 NR1H4Q96RI1 486 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 GAD1Q99259 594 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 PCDH9Q9HC56 1237 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 SAYSD1Q9NPB0 183 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 FAM105AQ9NUU6 356 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 DNAAF2Q9NVR5 837 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 HAO1Q9UJM8 370 aa17.68■□□□□ 0.42
SHKBP1-205ENST00000594973 APOC4-APOC2K7ER74 178 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 CYB561D2O14569 222 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 APOC2P02655 101 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 TAC1P20366 129 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 TARSP26639 723 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 TM4SF4P48230 202 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 NRLP54845 237 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 SNX16P57768 344 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 RNASELQ05823 741 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 MYBPC3Q14896 1274 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 CCDC6Q16204 474 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 FAM71DQ8N9W8 422 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 LZICQ8WZA0 190 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 PPP1R10Q96QC0 940 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 SUDS3Q9H7L9 328 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 NKIRAS1Q9NYS0 192 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 LNPEPQ9UIQ6 1025 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 CHKBQ9Y259 395 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 PCDHGA4Q9Y5G9 962 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 GMEB1Q9Y692 573 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 H0Y3Z8 333 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 CLDN5O00501 218 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 TCEA3O75764 348 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 BRAFP15056 766 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 PTPN4P29074 926 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 MAGEA4P43358 317 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 ATXN1P54253 815 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 CACNB2Q08289 660 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 SNX30Q5VWJ9 437 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 WSCD1Q658N2 575 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 C1orf228Q6PIY5 440 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 UNC45BQ8IWX7 931 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 B3GALNT2Q8NCR0 500 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 GDAP1Q8TB36 358 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 TNIP3Q96KP6 325 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 XPNPEP3Q9NQH7 507 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 ACTL7BQ9Y614 415 aa17.67■□□□□ 0.42
SHKBP1-205ENST00000594973 SMAPO00193 183 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 MCF2LO15068 1137 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 SEPT4O43236 478 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 ENTPD5O75356 428 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 ASGR1P07306 291 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 T-ENOLP0DO92 83 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 RBP3P10745 1247 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 EPHB2P29323 1055 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 HDAC4P56524 1084 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 FASTKD3Q14CZ7 662 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 CA9Q16790 459 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 PPP6R3Q5H9R7 873 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 RNASEH2BQ5TBB1 312 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 RNF169Q8NCN4 708 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 NDRG1Q92597 394 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 SENP6Q9GZR1 1112 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 TSPYL2Q9H2G4 693 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 FOXO6A8MYZ6 492 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 DPYSL4O14531 572 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 MAP3K6O95382 1288 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 FAM163BP0C2L3 166 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 ELNP15502 786 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 CREB1P16220 341 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 CCND3P30281 292 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 THPOP40225 353 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 SERPINB4P48594 390 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 IL9RQ01113 521 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 CAP1Q01518 475 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 MTM1Q13496 603 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 MPP2Q14168 576 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 C4orf50Q6ZRC1 276 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 CAPN12Q6ZSI9 719 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 SERINC5Q86VE9 423 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 ZDHHC17Q8IUH5 632 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 GSTCDQ8NEC7 633 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 SCG3Q8WXD2 468 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 TSPAN18Q96SJ8 248 aa17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 SNRNP25Q9BV90 132 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-205ENST00000594973 ADAM33Q9BZ11 813 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms