RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 PCDHGC3Q9UN70 934 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 RETP07949 1114 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 KIR2DL1P43626 348 aaPredicted RBP18.09■□□□□ 0.49
IRF3-208ENST00000594387 RPL34P49207 117 aaKnown RBP18.09■□□□□ 0.49
IRF3-208ENST00000594387 YWHAZP63104 245 aaKnown RBP18.09■□□□□ 0.49
IRF3-208ENST00000594387 ARID5AQ03989 594 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 SRSF5Q13243 272 aaKnown RBP18.09■□□□□ 0.49
IRF3-208ENST00000594387 BYSLQ13895 437 aaKnown RBP18.09■□□□□ 0.49
IRF3-208ENST00000594387 DRAP1Q14919 205 aaPredicted RBP18.09■□□□□ 0.49
IRF3-208ENST00000594387 EFHC1Q5JVL4 640 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 ADGRF1Q5T601 910 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 KLHDC7AQ5VTJ3 777 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 TMEM110Q86TL2 294 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 C11orf74Q86VG3 221 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 CCDC117Q8IWD4 279 aaPredicted RBP18.09■□□□□ 0.49
IRF3-208ENST00000594387 PHTF2Q8N3S3 785 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 DCLK2Q8N568 766 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 IPO4Q8TEX9 1081 aaKnown RBP18.09■□□□□ 0.49
IRF3-208ENST00000594387 TMA16Q96EY4 203 aaKnown RBP18.09■□□□□ 0.49
IRF3-208ENST00000594387 PPP1R13BQ96KQ4 1090 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 LHX5Q9H2C1 402 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 POPDC2Q9HBU9 364 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 ACP6Q9NPH0 428 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 POLR3BQ9NW08 1133 aaPredicted RBP18.09■□□□□ 0.49
IRF3-208ENST00000594387 FANCLQ9NW38 375 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 USP18Q9UMW8 372 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 STARD13Q9Y3M8 1113 aa18.09■□□□□ 0.49
IRF3-208ENST00000594387 RIF1Q5UIP0 2472 aaKnown RBP18.08■□□□□ 0.49
IRF3-208ENST00000594387 E5RJQ4 531 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 MSI1O43347 362 aaKnown RBP18.08■□□□□ 0.48
IRF3-208ENST00000594387 GABBR2O75899 941 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 RHOBTB1O94844 696 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 NTSR1P30989 418 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 GBP1P32455 592 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 RING1Q06587 406 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 KCNMA1Q12791 1236 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 PDCLQ13371 301 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 ELF2Q15723 593 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 CDKAL1Q5VV42 579 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 ANO7Q6IWH7 933 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 BEND5Q7L4P6 421 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 PASD1Q8IV76 773 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 FAM71AQ8IYT1 594 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 CHPFQ8IZ52 775 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 MSANTD4Q8NCY6 345 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 IRX2Q9BZI1 471 aaPredicted RBP18.08■□□□□ 0.48
IRF3-208ENST00000594387 SLC12A6Q9UHW9 1150 aa18.08■□□□□ 0.48
IRF3-208ENST00000594387 NUP205Q92621 2012 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 SGK1O00141 431 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 NPC1O15118 1278 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 TSPAN3O60637 253 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 PENKP01210 267 aaPredicted RBP18.07■□□□□ 0.48
IRF3-208ENST00000594387 APOEP02649 317 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 HOXB2P14652 356 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 UCHL3P15374 230 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 CLCN1P35523 988 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 KRT31Q15323 416 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 FYB2Q5VWT5 728 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 OR6B2Q6IFH4 312 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 C11orf57Q6ZUT1 292 aaPredicted RBP18.07■□□□□ 0.48
IRF3-208ENST00000594387 TOGARAM2Q6ZUX3 1019 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 SLC47A2Q86VL8 602 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 FAM160A2Q8N612 972 aaPredicted RBP18.07■□□□□ 0.48
IRF3-208ENST00000594387 ZNF557Q8N988 423 aaPredicted RBP18.07■□□□□ 0.48
IRF3-208ENST00000594387 TMEM35BQ8NCS4 154 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 AZIN2Q96A70 460 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 STK33Q9BYT3 514 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 PLCB1Q9NQ66 1216 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 FBXO10Q9UK96 956 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 NAALADL1Q9UQQ1 740 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 TLR6Q9Y2C9 796 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 SLC27A6Q9Y2P4 619 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 DAAM1Q9Y4D1 1078 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 FHOD1Q9Y613 1164 aa18.07■□□□□ 0.48
IRF3-208ENST00000594387 TRIM24O15164 1050 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 IRAK2O43187 625 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 PAPSS1O43252 624 aaPredicted RBP18.06■□□□□ 0.48
IRF3-208ENST00000594387 MAP3K13O43283 966 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 TIMM44O43615 452 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 ACSL4O60488 711 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 FOXD2O60548 495 aaPredicted RBP18.06■□□□□ 0.48
IRF3-208ENST00000594387 LRP3O75074 770 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 GLI1P08151 1106 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 CISD3P0C7P0 127 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 MESP2Q0VG99 397 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 NNTQ13423 1086 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 ANKS1BQ7Z6G8 1248 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 SFTPA1Q8IWL2 248 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 FAM217AQ8IXS0 508 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 DQX1Q8TE96 717 aaKnown RBP18.06■□□□□ 0.48
IRF3-208ENST00000594387 HMGB4Q8WW32 186 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 RNF34Q969K3 372 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 LOXL4Q96JB6 756 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 SPACA7Q96KW9 195 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 SPAG5Q96R06 1193 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 TPSD1Q9BZJ3 242 aa18.06■□□□□ 0.48
IRF3-208ENST00000594387 TCRBV21S2A2A0A5A6 115 aa18.05■□□□□ 0.48
IRF3-208ENST00000594387 SMTNL1A8MU46 457 aa18.05■□□□□ 0.48
IRF3-208ENST00000594387 GFRA2O00451 464 aa18.05■□□□□ 0.48
IRF3-208ENST00000594387 SLC2A3P11169 496 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms