RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 MFAP3P55082 362 aa24.34■■□□□ 1.49
MBD3-211ENST00000592965 CNGA2Q16280 664 aa24.34■■□□□ 1.49
MBD3-211ENST00000592965 BSPRYQ5W0U4 402 aa24.34■■□□□ 1.49
MBD3-211ENST00000592965 RNF43Q68DV7 783 aa24.34■■□□□ 1.49
MBD3-211ENST00000592965 FMNL3Q8IVF7 1028 aa24.34■■□□□ 1.49
MBD3-211ENST00000592965 TRIML1Q8N9V2 468 aa24.34■■□□□ 1.49
MBD3-211ENST00000592965 IPO4Q8TEX9 1081 aaKnown RBP24.34■■□□□ 1.49
MBD3-211ENST00000592965 RNF139Q8WU17 664 aa24.34■■□□□ 1.49
MBD3-211ENST00000592965 SLC35F5Q8WV83 523 aa24.34■■□□□ 1.49
MBD3-211ENST00000592965 ZSWIM1Q9BR11 485 aa24.34■■□□□ 1.49
MBD3-211ENST00000592965 LNP1A1A4G5 178 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 RNF225M0QZC1 329 aaPredicted RBP24.33■■□□□ 1.49
MBD3-211ENST00000592965 KHNYNO15037 678 aaKnown RBP24.33■■□□□ 1.49
MBD3-211ENST00000592965 CYBBP04839 570 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 STX17P56962 302 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 DAOAP59103 153 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 KCNH2Q12809 1159 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 FRMD1Q8N878 549 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 RBBP8NLQ8NC74 664 aaPredicted RBP24.33■■□□□ 1.49
MBD3-211ENST00000592965 EHBP1Q8NDI1 1231 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 IRGQQ8WZA9 623 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 ABCC13Q9NSE7 274 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 CACNA2D2Q9NY47 1150 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.33■■□□□ 1.49
MBD3-211ENST00000592965 CEP295Q9C0D2 2601 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 CKAP5Q14008 2032 aa24.33■■□□□ 1.49
MBD3-211ENST00000592965 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.32■■□□□ 1.48
MBD3-211ENST00000592965 M0QYV0 167 aa24.32■■□□□ 1.48
MBD3-211ENST00000592965 NPC1O15118 1278 aa24.32■■□□□ 1.48
MBD3-211ENST00000592965 ZBTB24O43167 697 aaPredicted RBP24.32■■□□□ 1.48
MBD3-211ENST00000592965 AFPP02771 609 aaKnown RBP24.32■■□□□ 1.48
MBD3-211ENST00000592965 BRD2P25440 801 aaKnown RBP24.32■■□□□ 1.48
MBD3-211ENST00000592965 HARS2P49590 506 aaKnown RBP24.32■■□□□ 1.48
MBD3-211ENST00000592965 KIAA1211LQ6NV74 962 aa24.32■■□□□ 1.48
MBD3-211ENST00000592965 PMF1Q6P1K2 205 aa24.32■■□□□ 1.48
MBD3-211ENST00000592965 MSANTD2Q6P1R3 559 aa24.32■■□□□ 1.48
MBD3-211ENST00000592965 RRAGAQ7L523 313 aa24.32■■□□□ 1.48
MBD3-211ENST00000592965 ARHGEF19Q8IW93 802 aa24.32■■□□□ 1.48
MBD3-211ENST00000592965 TMEFF1Q8IYR6 380 aa24.32■■□□□ 1.48
MBD3-211ENST00000592965 EDEM1Q92611 657 aa24.32■■□□□ 1.48
MBD3-211ENST00000592965 SLC2A11Q9BYW1 496 aa24.32■■□□□ 1.48
MBD3-211ENST00000592965 GABBR2O75899 941 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 FGFR1OPO95684 399 aaKnown RBP24.31■■□□□ 1.48
MBD3-211ENST00000592965 LATS1O95835 1130 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 LCP1P13796 627 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 NDUFV2P19404 249 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 DPP6P42658 865 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 PTGER3P43115 390 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 RGS7P49802 495 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 ZNF445P59923 1031 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 GEN1Q17RS7 908 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 SLC36A4Q6YBV0 504 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 ANKS1BQ7Z6G8 1248 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 PIGKQ92643 395 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 PIWIL1Q96J94 861 aaKnown RBP24.31■■□□□ 1.48
MBD3-211ENST00000592965 HSFY1Q96LI6 401 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 KREMEN1Q96MU8 473 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 LSM14BQ9BX40 385 aaKnown RBP24.31■■□□□ 1.48
MBD3-211ENST00000592965 SRRTQ9BXP5 876 aaKnown RBP24.31■■□□□ 1.48
MBD3-211ENST00000592965 INTS2Q9H0H0 1204 aaKnown RBP24.31■■□□□ 1.48
MBD3-211ENST00000592965 EVLQ9UI08 416 aaPredicted RBP24.31■■□□□ 1.48
MBD3-211ENST00000592965 STOML2Q9UJZ1 356 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 CNTN6Q9UQ52 1028 aa24.31■■□□□ 1.48
MBD3-211ENST00000592965 ASCC3Q8N3C0 2202 aaKnown RBP24.31■■□□□ 1.48
MBD3-211ENST00000592965 ZNF217O75362 1048 aa24.3■■□□□ 1.48
MBD3-211ENST00000592965 HOXD12P35452 270 aa24.3■■□□□ 1.48
MBD3-211ENST00000592965 UBE2HP62256 183 aa24.3■■□□□ 1.48
MBD3-211ENST00000592965 ENPP2Q13822 863 aa24.3■■□□□ 1.48
MBD3-211ENST00000592965 EIF4HQ15056 248 aaKnown RBP24.3■■□□□ 1.48
MBD3-211ENST00000592965 E2F5Q15329 346 aa24.3■■□□□ 1.48
MBD3-211ENST00000592965 LYSMD4Q5XG99 296 aa24.3■■□□□ 1.48
MBD3-211ENST00000592965 SYT12Q8IV01 421 aa24.3■■□□□ 1.48
MBD3-211ENST00000592965 DDI1Q8WTU0 396 aa24.3■■□□□ 1.48
MBD3-211ENST00000592965 THAP10Q9P2Z0 257 aaPredicted RBP24.3■■□□□ 1.48
MBD3-211ENST00000592965 SFMBT1Q9UHJ3 866 aa24.3■■□□□ 1.48
MBD3-211ENST00000592965 RAD54BQ9Y620 910 aa24.3■■□□□ 1.48
MBD3-211ENST00000592965 STON1Q9Y6Q2 735 aa24.3■■□□□ 1.48
MBD3-211ENST00000592965 CACNA1EQ15878 2313 aa24.29■■□□□ 1.48
MBD3-211ENST00000592965 PATE3B3GLJ2 98 aa24.29■■□□□ 1.48
MBD3-211ENST00000592965 AP5Z1O43299 807 aa24.29■■□□□ 1.48
MBD3-211ENST00000592965 FBXO21O94952 628 aa24.29■■□□□ 1.48
MBD3-211ENST00000592965 MPPE1Q53F39 396 aa24.29■■□□□ 1.48
MBD3-211ENST00000592965 PEAR1Q5VY43 1037 aaPredicted RBP24.29■■□□□ 1.48
MBD3-211ENST00000592965 ARMCX6Q7L4S7 300 aa24.29■■□□□ 1.48
MBD3-211ENST00000592965 UCMAQ8WVF2 138 aa24.29■■□□□ 1.48
MBD3-211ENST00000592965 MRGPRX1Q96LB2 322 aa24.29■■□□□ 1.48
MBD3-211ENST00000592965 KIAA1468Q9P260 1216 aa24.29■■□□□ 1.48
MBD3-211ENST00000592965 RWDD2AQ9UIY3 292 aa24.29■■□□□ 1.48
MBD3-211ENST00000592965 CLEC4EQ9ULY5 219 aa24.29■■□□□ 1.48
MBD3-211ENST00000592965 IGHV1OR15-9A0A0B4J2B8 117 aa24.28■■□□□ 1.48
MBD3-211ENST00000592965 MSI1O43347 362 aaKnown RBP24.28■■□□□ 1.48
MBD3-211ENST00000592965 CALCAP01258 141 aa24.28■■□□□ 1.48
MBD3-211ENST00000592965 IGLV3-27P01718 113 aa24.28■■□□□ 1.48
MBD3-211ENST00000592965 HOXD9P28356 352 aaPredicted RBP24.28■■□□□ 1.48
MBD3-211ENST00000592965 RPL6Q02878 288 aaKnown RBP24.28■■□□□ 1.48
MBD3-211ENST00000592965 STARD3Q14849 445 aa24.28■■□□□ 1.48
MBD3-211ENST00000592965 ADGRF1Q5T601 910 aa24.28■■□□□ 1.48
MBD3-211ENST00000592965 PILRBQ9UKJ0 227 aa24.28■■□□□ 1.48
MBD3-211ENST00000592965 MAP1BP46821 2468 aaKnown RBP24.28■■□□□ 1.48
MBD3-211ENST00000592965 CACNA1BQ00975 2339 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms