RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 GRIK3Q13003 919 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 IKZF1Q13422 519 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 PRPF4BQ13523 1007 aaKnown RBP8.19□□□□□ -1.1
VMP1-213ENST00000591877 CUL4AQ13619 759 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 GIT2Q14161 759 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 MLC1Q15049 377 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 MAPK6Q16659 721 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 RARS2Q5T160 578 aaKnown RBP8.19□□□□□ -1.1
VMP1-213ENST00000591877 KRT79Q5XKE5 535 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 C1orf186Q6ZWK4 172 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 RASSF3Q86WH2 238 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 CREG2Q8IUH2 290 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 DEPTORQ8TB45 409 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 LRRC15Q8TF66 581 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 EDAQ92838 391 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 KIFAP3Q92845 792 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 B3GALT6Q96L58 329 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 RPS6KC1Q96S38 1066 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 C2orf40Q9H1Z8 148 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 SMURF1Q9HCE7 757 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 PNMA8BQ9ULN7 279 aaPredicted RBP8.19□□□□□ -1.1
VMP1-213ENST00000591877 LUC7L2Q9Y383 392 aaKnown RBP8.19□□□□□ -1.1
VMP1-213ENST00000591877 KIF3AQ9Y496 699 aa8.19□□□□□ -1.1
VMP1-213ENST00000591877 MUC6Q6W4X9 2439 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 VWA3AA6NCI4 1184 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 C2CD4DB7Z1M9 353 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 NPIPB6E9PJ23 425 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 H3BQV1 296 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 ABLIM1O14639 778 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 TEX28O15482 410 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 TGM5O43548 720 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 HIP1RO75146 1068 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 RECQL4O94761 1208 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 MYL1P05976 194 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 GLI1P08151 1106 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 MYBL2P10244 700 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 RBP3P10745 1247 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 KLRC2P26717 231 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 RPL10P27635 214 aaKnown RBP8.18□□□□□ -1.1
VMP1-213ENST00000591877 LSP1P33241 339 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 NPTX2P47972 431 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 GLUD2P49448 558 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 PEX3P56589 373 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 ZXDAP98168 799 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 GRIN1Q05586 938 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 TERF2Q15554 542 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 FIGNQ5HY92 759 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 ATF7IP2Q5U623 682 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 BROXQ5VW32 411 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 KIAA1841Q6NSI8 718 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 FUT10Q6P4F1 479 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 C14orf80Q86SX3 495 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 HACE1Q8IYU2 909 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 TMEM52Q8NDY8 209 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 ASB11Q8WXH4 323 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 IFT74Q96LB3 600 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 PLIN2Q99541 437 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 COLEC11Q9BWP8 271 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 RAB34Q9BZG1 259 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 UPF2Q9HAU5 1272 aaKnown RBP8.18□□□□□ -1.1
VMP1-213ENST00000591877 RXFP1Q9HBX9 757 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 ARNT2Q9HBZ2 717 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 PTPRHQ9HD43 1115 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 MRPL17Q9NRX2 175 aaKnown RBP8.18□□□□□ -1.1
VMP1-213ENST00000591877 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.18□□□□□ -1.1
VMP1-213ENST00000591877 ARHGAP28Q9P2N2 729 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 STK39Q9UEW8 545 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 ADAM28Q9UKQ2 775 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 DNM3Q9UQ16 869 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 SMC3Q9UQE7 1217 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 ANKRD6Q9Y2G4 727 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 DOCK8Q8NF50 2099 aa8.18□□□□□ -1.1
VMP1-213ENST00000591877 CASTOR2A6NHX0 329 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 K7ERI5 159 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 URODP06132 367 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 MYBP10242 640 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 CCND1P24385 295 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 MTHFRP42898 656 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 AFMP43652 599 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 EFNA5P52803 228 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 SLC12A3P55017 1021 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 IRF9Q00978 393 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 TUSC3Q13454 348 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 MAP9Q49MG5 647 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 TMEM119Q4V9L6 283 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 MROH9Q5TGP6 573 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 ARL6IP4Q66PJ3 421 aaKnown RBP8.17□□□□□ -1.1
VMP1-213ENST00000591877 CES5AQ6NT32 575 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 CD300LGQ6UXG3 332 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 TMC5Q6UXY8 1006 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 CEP68Q76N32 757 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 OTOP3Q7RTS5 596 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 GPR149Q86SP6 731 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 CABP7Q86V35 215 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 SYT2Q8N9I0 419 aaPredicted RBP8.17□□□□□ -1.1
VMP1-213ENST00000591877 ZNF610Q8N9Z0 462 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 C1orf162Q8NEQ5 155 aaPredicted RBP8.17□□□□□ -1.1
VMP1-213ENST00000591877 HASPINQ8TF76 798 aa8.17□□□□□ -1.1
VMP1-213ENST00000591877 TRMT2BQ96GJ1 504 aaKnown RBP8.17□□□□□ -1.1
VMP1-213ENST00000591877 NECTIN4Q96NY8 510 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms