RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	GAS2L3	Q86XJ1	694 aa		13.93	□□□□□ -0.18
NPC1-212	ENST00000591107	KIAA1958	Q8N8K9	716 aa		13.93	□□□□□ -0.18
NPC1-212	ENST00000591107	GOLGA5	Q8TBA6	731 aa		13.93	□□□□□ -0.18
NPC1-212	ENST00000591107	EEF2KMT	Q96G04	330 aa		13.93	□□□□□ -0.18
NPC1-212	ENST00000591107	TLR8	Q9NR97	1041 aa	Known RBP	13.93	□□□□□ -0.18
NPC1-212	ENST00000591107	RASAL2	Q9UJF2	1139 aa		13.93	□□□□□ -0.18
NPC1-212	ENST00000591107	NAGPA	Q9UK23	515 aa		13.93	□□□□□ -0.18
NPC1-212	ENST00000591107	RHOBTB3	O94955	611 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	P4HA1	P13674	534 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	CEACAM1	P13688	526 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	CD46	P15529	392 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	BMP6	P22004	513 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	MAOB	P27338	520 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	DGKG	P49619	791 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	AP3M2	P53677	418 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	SIM1	P81133	766 aa	Predicted RBP	13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	ZNF33A	Q06730	810 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	LMAN2	Q12907	356 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	SGSM1	Q2NKQ1	1148 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	SLC23A3	Q6PIS1	610 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	HTR3D	Q70Z44	454 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	SCD5	Q86SK9	330 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	SLC9A9	Q8IVB4	645 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	CRYBG2	Q8N1P7	616 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	GATA6	Q92908	595 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	CYFIP2	Q96F07	1278 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	CAMK1G	Q96NX5	476 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	ARID3A	Q99856	593 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	FBXO44	Q9H4M3	255 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	CYLD	Q9NQC7	956 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	LSM7	Q9UK45	103 aa	Known RBP	13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	SCML2	Q9UQR0	700 aa		13.92	□□□□□ -0.18
NPC1-212	ENST00000591107	AP5Z1	O43299	807 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	STC2	O76061	302 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	KLKB1	P03952	638 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	NR2F2	P24468	414 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	ATP5C1	P36542	298 aa	Known RBP	13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	VAMP7	P51809	220 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	ATXN3	P54252	364 aa	Predicted RBP	13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	INCA1	Q0VD86	236 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	EFEMP1	Q12805	493 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	GEN1	Q17RS7	908 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.91	□□□□□ -0.18
NPC1-212	ENST00000591107		Q6ZNB5	142 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	TRMT11	Q7Z4G4	463 aa	Known RBP	13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	UNC93A	Q86WB7	457 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	SPNS2	Q8IVW8	549 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	MINDY1	Q8N5J2	469 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	NDRG1	Q92597	394 aa	Known RBP	13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	SEMA4D	Q92854	862 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	XPO6	Q96QU8	1125 aa	Known RBP	13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	HNRNPAB	Q99729	332 aa	Known RBP	13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	GABRG3	Q99928	467 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	NIF3L1	Q9GZT8	377 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	CAPN10	Q9HC96	672 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	MARK1	Q9P0L2	795 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	CLEC4E	Q9ULY5	219 aa		13.91	□□□□□ -0.18
NPC1-212	ENST00000591107	PDXK	O00764	312 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	CILP	O75339	1184 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	CISD3	P0C7P0	127 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	IL12RB1	P42701	662 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	KIF11	P52732	1056 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	FAM186B	Q8IYM0	893 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	RGL4	Q8IZJ4	473 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	SORCS1	Q8WY21	1168 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	MRGPRX1	Q96LB2	322 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	NT5C1A	Q9BXI3	368 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	COMMD8	Q9NX08	183 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	SLC6A14	Q9UN76	642 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	VPS9D1	Q9Y2B5	631 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	FRMD4B	Q9Y2L6	1034 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	ZFYVE26	Q68DK2	2539 aa		13.9	□□□□□ -0.18
NPC1-212	ENST00000591107	MUC22	E2RYF6	1773 aa	Predicted RBP	13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	TULP2	O00295	520 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	CALU	O43852	315 aa	Predicted RBP	13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	CORO1A	P31146	461 aa	Known RBP	13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	GFPT1	Q06210	699 aa	Predicted RBP	13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	GOLGA8F	Q08AF8	430 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	GOLGA8DP	Q0D2H9	430 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	SEMA3B	Q13214	749 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	DUOXA1	Q1HG43	343 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	FUT11	Q495W5	492 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	FYB2	Q5VWT5	728 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	PIP4P1	Q86T03	277 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	HDDC3	Q8N4P3	179 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	ZCCHC9	Q8N567	271 aa	Known RBP	13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	MLKL	Q8NB16	471 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	TAF4B	Q92750	862 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	IMPG2	Q9BZV3	1241 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	MKRN2	Q9H000	416 aa	Known RBP	13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	RBSN	Q9H1K0	784 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	DACH1	Q9UI36	760 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	DNMT3L	Q9UJW3	386 aa		13.89	□□□□□ -0.19
NPC1-212	ENST00000591107	STARD13	Q9Y3M8	1113 aa		13.89	□□□□□ -0.19

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