RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 RHOBTB1O94844 696 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 ABCG1P45844 678 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 NEK4P51957 841 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 TEAD2Q15562 447 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 TARBP2Q15633 366 aaKnown RBP8.48□□□□□ -1.05
SMAD4-209ENST00000589941 FAM171A1Q5VUB5 890 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 SYDE1Q6ZW31 735 aaPredicted RBP8.48□□□□□ -1.05
SMAD4-209ENST00000589941 MTERF4Q7Z6M4 381 aaKnown RBP8.48□□□□□ -1.05
SMAD4-209ENST00000589941 MFSD6LQ8IWD5 586 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 PPIL6Q8IXY8 311 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 ADAMTS14Q8WXS8 1223 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 PIGKQ92643 395 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 ZNF669Q96BR6 464 aaPredicted RBP8.48□□□□□ -1.05
SMAD4-209ENST00000589941 RRP36Q96EU6 259 aaKnown RBP8.48□□□□□ -1.05
SMAD4-209ENST00000589941 FAM84AQ96KN4 292 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 TTPALQ9BTX7 342 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 COLEC11Q9BWP8 271 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 SEMA4CQ9C0C4 833 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 PRORYQ9H606 182 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 SLC8A2Q9UPR5 921 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 CDY1Q9Y6F8 540 aa8.48□□□□□ -1.05
SMAD4-209ENST00000589941 DOPEY1Q5JWR5 2465 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 IGKV6-21A0A0C4DH24 114 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 ANTXRLA6NF34 631 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 IPO5O00410 1097 aaKnown RBP8.47□□□□□ -1.05
SMAD4-209ENST00000589941 DYNC1I1O14576 645 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 ADAMTS3O15072 1205 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 SGSM2O43147 1006 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 LETM1O95202 739 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-209ENST00000589941 EGFP01133 1207 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 KRT1P04264 644 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 PRKCBP05771 671 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 KRT10P13645 584 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 LCP1P13796 627 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 CD59P13987 128 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 U2AF2P26368 475 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMAD4-209ENST00000589941 DHPSP49366 369 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-209ENST00000589941 MLLT6P55198 1093 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-209ENST00000589941 CFHR1Q03591 330 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 FCHO2Q0JRZ9 810 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 MAP4K2Q12851 820 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 E4F1Q66K89 784 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-209ENST00000589941 BICRALQ6AI39 1079 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 RALGPS2Q86X27 583 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-209ENST00000589941 SRBD1Q8N5C6 995 aaKnown RBP8.47□□□□□ -1.05
SMAD4-209ENST00000589941 MSANTD3Q96H12 275 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 CPB2Q96IY4 423 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 FAM167AQ96KS9 214 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 SRPK1Q96SB4 655 aaKnown RBP8.47□□□□□ -1.05
SMAD4-209ENST00000589941 OSBPL2Q9H1P3 480 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 TSPY26PQ9H489 355 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 C8orf33Q9H7E9 229 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-209ENST00000589941 TRPV4Q9HBA0 871 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 DKK4Q9UBT3 224 aa8.47□□□□□ -1.05
SMAD4-209ENST00000589941 EVLQ9UI08 416 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-209ENST00000589941 TCHHQ07283 1943 aa8.46□□□□□ -1.05
SMAD4-209ENST00000589941 ARHGEF37A1IGU5 675 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 SYCE3A1L190 88 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 CHADO15335 359 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 NPHS1O60500 1241 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 STBD1O95210 358 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 SEC24AO95486 1093 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 MPOP05164 745 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 DBHP09172 617 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 PABPC1P11940 636 aaKnown RBP8.46□□□□□ -1.06
SMAD4-209ENST00000589941 PTPN2P17706 415 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 AKAP5P24588 427 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 VIPR1P32241 457 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 PTGER3P43115 390 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 YBX1P67809 324 aaKnown RBP8.46□□□□□ -1.06
SMAD4-209ENST00000589941 SSRP1Q08945 709 aaKnown RBP8.46□□□□□ -1.06
SMAD4-209ENST00000589941 KARSQ15046 597 aaKnown RBP8.46□□□□□ -1.06
SMAD4-209ENST00000589941 ACBD5Q5T8D3 534 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-209ENST00000589941 FOXB2Q5VYV0 432 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 SASS6Q6UVJ0 657 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 RPTNQ6XPR3 784 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 ZNF410Q86VK4 478 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 PLA2G4DQ86XP0 818 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 RAB11FIP4Q86YS3 637 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 SYNPOQ8N3V7 929 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 LZTR1Q8N653 840 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 FRMD1Q8N878 549 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 RCBTB1Q8NDN9 531 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 KCTD13Q8WZ19 329 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 UBXN4Q92575 508 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 DIO2Q92813 273 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 EVI5LQ96CN4 794 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 FUCA2Q9BTY2 467 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 GTPBP2Q9BX10 602 aaKnown RBP8.46□□□□□ -1.06
SMAD4-209ENST00000589941 KRT23Q9C075 422 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 LSG1Q9H089 658 aaKnown RBP8.46□□□□□ -1.06
SMAD4-209ENST00000589941 IL25Q9H293 177 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 FZD8Q9H461 694 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 FBRSL1Q9HCM7 1045 aaKnown RBP8.46□□□□□ -1.06
SMAD4-209ENST00000589941 SUCLA2Q9P2R7 463 aaPredicted RBP8.46□□□□□ -1.06
SMAD4-209ENST00000589941 MTRRQ9UBK8 725 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 SEC63Q9UGP8 760 aaKnown RBP8.46□□□□□ -1.06
SMAD4-209ENST00000589941 FBXL7Q9UJT9 491 aa8.46□□□□□ -1.06
SMAD4-209ENST00000589941 FBN2P35556 2912 aa8.45□□□□□ -1.06
SMAD4-209ENST00000589941 TRAV20A0A0B4J274 112 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms