RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 CHKAP35790 457 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 GPR15P49685 360 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 EIF3BP55884 814 aaKnown RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 ARPP19P56211 112 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 EIF4EBP2Q13542 120 aaPredicted RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 USP41Q3LFD5 358 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 RNASEH2BQ5TBB1 312 aaKnown RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 RSPO2Q6UXX9 243 aaPredicted RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 BZW1Q7L1Q6 419 aaKnown RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 SCD5Q86SK9 330 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 MON1AQ86VX9 555 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 CCDC25Q86WR0 208 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 CDKL3Q8IVW4 592 aaPredicted RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 RNF168Q8IYW5 571 aaPredicted RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 ARHGAP18Q8N392 663 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 ZCCHC9Q8N567 271 aaKnown RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 RTP4Q96DX8 246 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 IGSF21Q96ID5 467 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 PKNOX2Q96KN3 472 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 TMEM106CQ9BVX2 250 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 EPB41L4BQ9H329 900 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 WDCPQ9H6R7 721 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 TMPRSS4Q9NRS4 437 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 TMEM51Q9NW97 253 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 IL37Q9NZH6 218 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 SHOC2Q9UQ13 582 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 MICAL3Q7RTP6 2002 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 FNDC1Q4ZHG4 1894 aaPredicted RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 EEF2KO00418 725 aaKnown RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 CSF2RAP15509 400 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 RAG1P15918 1043 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 RPL22P35268 128 aaKnown RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 HCAR3P49019 387 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 GBE1Q04446 702 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 SEMA3BQ13214 749 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 DENND2CQ68D51 928 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 MFSD5Q6N075 450 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 TMEM199Q8N511 208 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 SEMA4AQ9H3S1 761 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 SMOC2Q9H3U7 446 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 RC3H2Q9HBD1 1191 aaKnown RBP17.13■□□□□ 0.33
NFIX-210ENST00000588228 USP29Q9HBJ7 922 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 ANLNQ9NQW6 1124 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 MTRRQ9UBK8 725 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 BACE2Q9Y5Z0 518 aa17.13■□□□□ 0.33
NFIX-210ENST00000588228 I6L893 689 aaPredicted RBP17.12■□□□□ 0.33
NFIX-210ENST00000588228 IRAK2O43187 625 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 RIPK2O43353 540 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 CREB3O43889 395 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 HAPLN1P10915 354 aaPredicted RBP17.12■□□□□ 0.33
NFIX-210ENST00000588228 CTCFP49711 727 aaPredicted RBP17.12■□□□□ 0.33
NFIX-210ENST00000588228 DPYSQ14117 519 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 CEP85LQ5SZL2 805 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 SDHAF4Q5VUM1 108 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 SLC8B1Q6J4K2 584 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 KCNT2Q6UVM3 1135 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 PRSS55Q6UWB4 352 aaPredicted RBP17.12■□□□□ 0.33
NFIX-210ENST00000588228 RNF19BQ6ZMZ0 732 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 RFX8Q6ZV50 586 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 RELL1Q8IUW5 271 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 TTC9BQ8N6N2 239 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 SPATA17Q96L03 361 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 TKTL2Q9H0I9 626 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 NMUR1Q9HB89 426 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 COMMD8Q9NX08 183 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 DTLQ9NZJ0 730 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 VPS18Q9P253 973 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 FARP1Q9Y4F1 1045 aaPredicted RBP17.12■□□□□ 0.33
NFIX-210ENST00000588228 VWA8A3KMH1 1905 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 COL4A6Q14031 1691 aa17.12■□□□□ 0.33
NFIX-210ENST00000588228 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.11■□□□□ 0.33
NFIX-210ENST00000588228 A0A1W2PQH9 124 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 FAM92AA1XBS5 289 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 CARNS1A5YM72 827 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 GOLGA6L10A6NI86 522 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 HACD1B0YJ81 288 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 SMAPO00193 183 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 RTN3O95197 1032 aaPredicted RBP17.11■□□□□ 0.33
NFIX-210ENST00000588228 VNN2O95498 520 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 ACTN2P35609 894 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 WDR5P61964 334 aaKnown RBP17.11■□□□□ 0.33
NFIX-210ENST00000588228 DEFB103AP81534 67 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 ZNF844Q08AG5 666 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 SLC10A2Q12908 348 aaPredicted RBP17.11■□□□□ 0.33
NFIX-210ENST00000588228 PAFAH1B3Q15102 231 aaKnown RBP17.11■□□□□ 0.33
NFIX-210ENST00000588228 MGAT5BQ3V5L5 792 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 SLC45A4Q5BKX6 768 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 BRMS1LQ5PSV4 323 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 SPOUT1Q5T280 376 aaKnown RBP17.11■□□□□ 0.33
NFIX-210ENST00000588228 DENND5BQ6ZUT9 1274 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 HOOK3Q86VS8 718 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 PPIL6Q8IXY8 311 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 CMTR2Q8IYT2 770 aaKnown RBP17.11■□□□□ 0.33
NFIX-210ENST00000588228 FBXO22Q8NEZ5 403 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 OR2W6PQ8NHA6 318 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 ZNF558Q96NG5 402 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 OLFM3Q96PB7 478 aa17.11■□□□□ 0.33
NFIX-210ENST00000588228 QKIQ96PU8 341 aaKnown RBP eCLIP17.11■□□□□ 0.33
NFIX-210ENST00000588228 CDC42EP4Q9H3Q1 356 aaKnown RBP17.11■□□□□ 0.33
NFIX-210ENST00000588228 ETNK2Q9NVF9 386 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms