RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 NAALADL1Q9UQQ1 740 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 TLR6Q9Y2C9 796 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 MYO16Q9Y6X6 1858 aa10.54□□□□□ -0.72
TPM4-207ENST00000588032 COL4A3Q01955 1670 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 NEDD8-MDP1E9PL57 170 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 TEX33O43247 280 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 TULP3O75386 442 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 KAT7O95251 611 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 PENKP01210 267 aaPredicted RBP10.53□□□□□ -0.72
TPM4-207ENST00000588032 ERBB2P04626 1255 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 MMEP08473 750 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 SLC2A3P11169 496 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 TYRP14679 529 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 FERP16591 822 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 NBL1P41271 181 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 SLC6A11P48066 632 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 TBX4P57082 545 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 CDK17Q00537 523 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 CSTF1Q05048 431 aaKnown RBP10.53□□□□□ -0.72
TPM4-207ENST00000588032 GAS6Q14393 721 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 E2F5Q15329 346 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 NFKBIBQ15653 356 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 PTPN20Q4JDL3 420 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 MPPE1Q53F39 396 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 TAF3Q5VWG9 929 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 OR6B2Q6IFH4 312 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 OLFML1Q6UWY5 402 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 TPGS1Q6ZTW0 290 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 SLC26A9Q7LBE3 791 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 DQX1Q8TE96 717 aaKnown RBP10.53□□□□□ -0.72
TPM4-207ENST00000588032 NELL1Q92832 810 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 ACDQ96AP0 544 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 IQCDQ96DY2 449 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 NAP1L5Q96NT1 182 aaPredicted RBP10.53□□□□□ -0.72
TPM4-207ENST00000588032 SLC2A13Q96QE2 648 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 NUP58Q9BVL2 599 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 SLC2A11Q9BYW1 496 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 ARHGEF4Q9NR80 690 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 RRN3Q9NYV6 651 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 SLC12A6Q9UHW9 1150 aa10.53□□□□□ -0.72
TPM4-207ENST00000588032 NOCTQ9UK39 431 aaKnown RBP10.53□□□□□ -0.72
TPM4-207ENST00000588032 MIA3Q5JRA6 1907 aa10.52□□□□□ -0.72
TPM4-207ENST00000588032 ZDBF2Q9HCK1 2354 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 TBC1D3BA6NDS4 549 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 PROB1E7EW31 1015 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 K7EQS6 105 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 IRAK2O43187 625 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 MSI1O43347 362 aaKnown RBP10.52□□□□□ -0.73
TPM4-207ENST00000588032 RNF40O75150 1001 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 TRUB2O95900 331 aaKnown RBP10.52□□□□□ -0.73
TPM4-207ENST00000588032 CYP1A1P04798 512 aaPredicted RBP10.52□□□□□ -0.73
TPM4-207ENST00000588032 TPM3P06753 285 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 NOS2P35228 1153 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 UBASH3AP57075 661 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 NOMO3P69849 1222 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 FANCCQ00597 558 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 DCAF6Q58WW2 860 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 FIGNQ5HY92 759 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 MPP7Q5T2T1 576 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 SYPL2Q5VXT5 272 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 NAIF1Q69YI7 327 aaPredicted RBP10.52□□□□□ -0.73
TPM4-207ENST00000588032 GRAMD4Q6IC98 578 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 Q6ZS52 159 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 FAM183BPQ6ZVS7 135 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 SYT13Q7L8C5 426 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 ARCQ7LC44 396 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 C12orf40Q86WS4 652 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 PHTF2Q8N3S3 785 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 CAMKK1Q8N5S9 505 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 NAT16Q8N8M0 369 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 ZNF557Q8N988 423 aaPredicted RBP10.52□□□□□ -0.73
TPM4-207ENST00000588032 USP33Q8TEY7 942 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 ATRIPQ8WXE1 791 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 TMA16Q96EY4 203 aaKnown RBP10.52□□□□□ -0.73
TPM4-207ENST00000588032 SLC39A13Q96H72 371 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 NUCKS1Q9H1E3 243 aaKnown RBP10.52□□□□□ -0.73
TPM4-207ENST00000588032 TSPY26PQ9H489 355 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 DNAJC17Q9NVM6 304 aaKnown RBP10.52□□□□□ -0.73
TPM4-207ENST00000588032 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.52□□□□□ -0.73
TPM4-207ENST00000588032 ZSCAN32Q9NX65 697 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 TJP2Q9UDY2 1190 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 FBXO10Q9UK96 956 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 SLC8A2Q9UPR5 921 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 PCDHGA2Q9Y5H1 932 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 F5P12259 2224 aa10.52□□□□□ -0.73
TPM4-207ENST00000588032 CCDC163A0A0D9SF12 145 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 ACSL4O60488 711 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 DAB1O75553 588 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 F9P00740 461 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 IGLV3-25P01717 112 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 APOEP02649 317 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 CHRNB2P17787 502 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 MMP8P22894 467 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 CNR2P34972 360 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 MATKP42679 507 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 DGKGP49619 791 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 FMO1Q01740 532 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 SATB1Q01826 763 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 ARID5AQ03989 594 aa10.51□□□□□ -0.73
TPM4-207ENST00000588032 EIF4EBP2Q13542 120 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms