RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 CDKL5O76039 1030 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 NDUFA10O95299 355 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 ALADP13716 330 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 CHN1P15882 459 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 MMP8P22894 467 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 LIPAP38571 399 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 EIF2B5Q13144 721 aaKnown RBP6.07□□□□□ -1.44
TUBD1-208ENST00000588009 BEAN1Q3B7T3 259 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 R3HCC1LQ7Z5L2 792 aaKnown RBP6.07□□□□□ -1.44
TUBD1-208ENST00000588009 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.07□□□□□ -1.44
TUBD1-208ENST00000588009 PTGR2Q8N8N7 351 aaPredicted RBP6.07□□□□□ -1.44
TUBD1-208ENST00000588009 NGDNQ8NEJ9 315 aaKnown RBP6.07□□□□□ -1.44
TUBD1-208ENST00000588009 ZMIZ2Q8NF64 920 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 EDAQ92838 391 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 FUBP1Q96AE4 644 aaKnown RBP6.07□□□□□ -1.44
TUBD1-208ENST00000588009 CTHRC1Q96CG8 243 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 R3HDM4Q96D70 268 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 APOPT1Q96IL0 206 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 PPP1R10Q96QC0 940 aaKnown RBP6.07□□□□□ -1.44
TUBD1-208ENST00000588009 FUZQ9BT04 418 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 HERC2P3Q9BVR0 1158 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 SLC12A4Q9UP95 1085 aa6.07□□□□□ -1.44
TUBD1-208ENST00000588009 TDRD9Q8NDG6 1382 aaKnown RBP6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TBC1D3DA0A087WVF3 549 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TBC1D3IA0A087WXS9 549 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TBC1D3EA0A087X179 549 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TBC1D3KA0A087X1G2 549 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TBC1D3BA6NDS4 549 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TBC1D3FA6NER0 549 aaPredicted RBP6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TBC1D3LB9A6J9 549 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 PEX12O00623 359 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 MUSKO15146 869 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 ANP32CO43423 234 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 SPRY2O43597 315 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 PMPCBO75439 489 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 CYP3A4P08684 503 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TBC1D3HP0C7X1 549 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TGM1P22735 817 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 MCM5P33992 734 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 POLD2P49005 469 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 CCR9P51686 369 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 ITIH3Q06033 890 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TOB2Q14106 344 aaPredicted RBP6.06□□□□□ -1.44
TUBD1-208ENST00000588009 UBXN11Q5T124 520 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TREML2Q5T2D2 321 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 LIPMQ5VYY2 423 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 FAM205BPQ63HN1 556 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TBC1D3GQ6DHY5 549 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TBC1D3CQ6IPX1 549 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 DENND1BQ6P3S1 775 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 C16orf89Q6UX73 402 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 P3H2Q8IVL5 708 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TBC1D3Q8IZP1 549 aaPredicted RBP6.06□□□□□ -1.44
TUBD1-208ENST00000588009 CPEB3Q8NE35 698 aaKnown RBP6.06□□□□□ -1.44
TUBD1-208ENST00000588009 RSRC1Q96IZ7 334 aaKnown RBP6.06□□□□□ -1.44
TUBD1-208ENST00000588009 ADAM2Q99965 735 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 SDF4Q9BRK5 362 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 PHF7Q9BWX1 381 aaPredicted RBP6.06□□□□□ -1.44
TUBD1-208ENST00000588009 ARHGAP39Q9C0H5 1083 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 TAOK3Q9H2K8 898 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 CNOT7Q9UIV1 285 aaKnown RBP6.06□□□□□ -1.44
TUBD1-208ENST00000588009 GDAQ9Y2T3 454 aa6.06□□□□□ -1.44
TUBD1-208ENST00000588009 CCDC187A0A096LP49 1063 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 PI4KAP2A4QPH2 592 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 TCERG1O14776 1098 aaKnown RBP6.05□□□□□ -1.44
TUBD1-208ENST00000588009 FESP07332 822 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 PEPDP12955 493 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 CREB1P16220 341 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 BMP7P18075 431 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 RPS6KB1P23443 525 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 CHMP24386 653 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 DDX6P26196 483 aaKnown RBP eCLIP6.05□□□□□ -1.44
TUBD1-208ENST00000588009 GKP32189 559 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 GRK5P34947 590 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 BMPR1AP36894 532 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 PNPLA4P41247 253 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 PCP4P48539 62 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 RCAN1P53805 252 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 NXPH1P58417 271 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 RPP30P78346 268 aaKnown RBP6.05□□□□□ -1.44
TUBD1-208ENST00000588009 NUCB1Q02818 461 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 ERV3-1Q14264 604 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 TBCCQ15814 346 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 NFIL3Q16649 462 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 HS1BP3Q53T59 392 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 ACSM6Q6P461 480 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 TMTC3Q6ZXV5 915 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 H1FNTQ75WM6 255 aaPredicted RBP6.05□□□□□ -1.44
TUBD1-208ENST00000588009 TMPRSS6Q8IU80 811 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 TMTC2Q8N394 836 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 C1orf131Q8NDD1 294 aaKnown RBP6.05□□□□□ -1.44
TUBD1-208ENST00000588009 FKBP10Q96AY3 582 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 ARRDC3Q96B67 414 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 SERINC2Q96SA4 455 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 DKK2Q9UBU2 259 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 ASAP1Q9ULH1 1129 aa6.05□□□□□ -1.44
TUBD1-208ENST00000588009 CA12O43570 354 aa6.04□□□□□ -1.44
TUBD1-208ENST00000588009 DHX16O60231 1041 aaKnown RBP6.04□□□□□ -1.44
TUBD1-208ENST00000588009 DOK2O60496 412 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms