RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 CCSAPQ6IQ19 270 aaPredicted RBP9.99□□□□□ -0.81
LINC01539-201ENST00000587904 DRICH1Q6PGQ1 229 aaPredicted RBP9.99□□□□□ -0.81
LINC01539-201ENST00000587904 SPATA24Q86W54 205 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 CRYBG2Q8N1P7 616 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 TMEM130Q8N3G9 435 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 APPL2Q8NEU8 664 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 CLIP3Q96DZ5 547 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 TNIP3Q96KP6 325 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 CAPNS2Q96L46 248 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 SLITRK1Q96PX8 696 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 PPP1R10Q96QC0 940 aaKnown RBP9.99□□□□□ -0.81
LINC01539-201ENST00000587904 NUDCD1Q96RS6 583 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 ELAC2Q9BQ52 826 aaKnown RBP9.99□□□□□ -0.81
LINC01539-201ENST00000587904 FRMD8P1Q9BZ68 369 aaPredicted RBP9.99□□□□□ -0.81
LINC01539-201ENST00000587904 CXCL16Q9H2A7 254 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 DPH5Q9H2P9 285 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 SNX25Q9H3E2 840 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 METTL5Q9NRN9 209 aaKnown RBP9.99□□□□□ -0.81
LINC01539-201ENST00000587904 FAM105AQ9NUU6 356 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 ASNSD1Q9NWL6 643 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 NMRK1Q9NWW6 199 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 DDX43Q9NXZ2 648 aaKnown RBP9.99□□□□□ -0.81
LINC01539-201ENST00000587904 MTRF1LQ9UGC7 380 aaKnown RBP9.99□□□□□ -0.81
LINC01539-201ENST00000587904 SRRDQ9UH36 339 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 ST3GAL5Q9UNP4 418 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 NOVA2Q9UNW9 492 aaKnown RBP9.99□□□□□ -0.81
LINC01539-201ENST00000587904 FAM32AQ9Y421 112 aaKnown RBP9.99□□□□□ -0.81
LINC01539-201ENST00000587904 TIMM22Q9Y584 194 aa9.99□□□□□ -0.81
LINC01539-201ENST00000587904 hCG_2014768A0A024R1R8 64 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 A8MXQ7 604 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 MYCLP1P12525 358 aaPredicted RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 WARSP23381 471 aaKnown RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 ZNF143P52747 638 aaPredicted RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 BCAT1P54687 386 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 EIF3BP55884 814 aaKnown RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 SLC25A11Q02978 314 aaKnown RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 PTK7Q13308 1070 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 PTK6Q13882 451 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 TRADDQ15628 312 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 CNGA3Q16281 694 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 KCNA10Q16322 511 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 ZNF362Q5T0B9 420 aaPredicted RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 FAM102AQ5T9C2 384 aaPredicted RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 MAP3K21Q5TCX8 1036 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 MARK2Q7KZI7 788 aaKnown RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 TMC3Q7Z5M5 1100 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 RNF180Q86T96 592 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 DDX42Q86XP3 938 aaKnown RBP eCLIP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 LRRC34Q8IZ02 419 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 OR6B3Q8NGW1 331 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 ATXN2LQ8WWM7 1075 aaKnown RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 CASP10Q92851 521 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 CNPY3Q9BT09 278 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 SLC4A5Q9BY07 1137 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 LRMDAQ9H2I8 198 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 RNF39Q9H2S5 420 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 ZDHHC18Q9NUE0 388 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 WHRNQ9P202 907 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 GIT1Q9Y2X7 761 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 MATN2O00339 956 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 DPYSL4O14531 572 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 PTGESO14684 152 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 NDC80O14777 642 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 HUS1O60921 280 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 CBFA2T3O75081 653 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 LRCH4O75427 683 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 SERPINB7O75635 380 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 CHRNA1P02708 482 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 SPATA31D3P0C874 917 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 NFKBIAP25963 317 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 GJC1P36383 396 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 GNL1P36915 607 aaPredicted RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 MAGOHP61326 146 aaKnown RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 CAV1Q03135 178 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 BST2Q10589 180 aaKnown RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 DCTN2Q13561 401 aaKnown RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 DEFB115Q30KQ5 88 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 TFDP3Q5H9I0 405 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 PPP1R26Q5T8A7 1209 aaPredicted RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 SPOCD1Q6ZMY3 1216 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 SPATA31D4Q6ZUB0 917 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 MRPL10Q7Z7H8 261 aaKnown RBP9.98□□□□□ -0.81
LINC01539-201ENST00000587904 ACOT1Q86TX2 421 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 KIF2BQ8N4N8 673 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 BBOF1Q8ND07 529 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 JOSD2Q8TAC2 188 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 KBTBD7Q8WVZ9 684 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 INPP5DQ92835 1189 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 NEUROG2Q9H2A3 272 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 ARHGEF38Q9NXL2 777 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 GRHL1Q9NZI5 618 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 KLK14Q9P0G3 267 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 SQORQ9Y6N5 450 aa9.98□□□□□ -0.81
LINC01539-201ENST00000587904 hCG_1818297A0A087WSY0 165 aa9.97□□□□□ -0.81
LINC01539-201ENST00000587904 MOXD2PA6NHM9 499 aa9.97□□□□□ -0.81
LINC01539-201ENST00000587904 E5RJQ4 531 aa9.97□□□□□ -0.81
LINC01539-201ENST00000587904 ZNF623O75123 536 aa9.97□□□□□ -0.81
LINC01539-201ENST00000587904 UNC5CO95185 931 aa9.97□□□□□ -0.81
LINC01539-201ENST00000587904 LYNP07948 512 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms