RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 ORC1Q13415 861 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 ZNF394Q53GI3 561 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 LY6G5CQ5SRR4 150 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 FKBP15Q5T1M5 1219 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 TRIM65Q6PJ69 517 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 RRAGAQ7L523 313 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 ARHGEF19Q8IW93 802 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 ETFBKMTQ8IXQ9 262 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 HDDC3Q8N4P3 179 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 MINDY1Q8N5J2 469 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 CAMK1GQ96NX5 476 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 MED10Q9BTT4 135 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 TSPY26PQ9H489 355 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 UBE2TQ9NPD8 197 aaPredicted RBP16.5■□□□□ 0.23
NCLN-203ENST00000587740 GPSM3Q9Y4H4 160 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 ASXL3Q9C0F0 2248 aa16.5■□□□□ 0.23
NCLN-203ENST00000587740 GCN1Q92616 2671 aaKnown RBP16.5■□□□□ 0.23
NCLN-203ENST00000587740 LRRC10BA6NIK2 292 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 H0Y626 953 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 AP5Z1O43299 807 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 TRIM16O95361 564 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 ABL1P00519 1130 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 ATP1A3P13637 1013 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 DPP6P42658 865 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 ATXN3P54252 364 aaPredicted RBP16.49■□□□□ 0.23
NCLN-203ENST00000587740 RPL6Q02878 288 aaKnown RBP16.49■□□□□ 0.23
NCLN-203ENST00000587740 GFPT1Q06210 699 aaPredicted RBP16.49■□□□□ 0.23
NCLN-203ENST00000587740 ZNF33AQ06730 810 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 TAF10Q12962 218 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 BYSLQ13895 437 aaKnown RBP16.49■□□□□ 0.23
NCLN-203ENST00000587740 C19orf48Q6RUI8 117 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 ENOSF1Q7L5Y1 443 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 LUZP1Q86V48 1076 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 MIB1Q86YT6 1006 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 SLC41A1Q8IVJ1 513 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 CEP76Q8TAP6 659 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 TWNKQ96RR1 684 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 B3GNT5Q9BYG0 378 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 ELOVL4Q9GZR5 314 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 CD248Q9HCU0 757 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 CALCOCO1Q9P1Z2 691 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 APEX2Q9UBZ4 518 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 PCDHB4Q9Y5E5 795 aa16.49■□□□□ 0.23
NCLN-203ENST00000587740 IGHV1OR15-9A0A0B4J2B8 117 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 ARHGAP33O14559 1287 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 TRIM24O15164 1050 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 GJB3O75712 270 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 ADH1CP00326 375 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 PPP3CCP48454 512 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 MFAP3P55082 362 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 SCAPQ12770 1279 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 ZNF423Q2M1K9 1284 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 FILIP1LQ4L180 1135 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 SOWAHCQ53LP3 525 aaPredicted RBP16.48■□□□□ 0.23
NCLN-203ENST00000587740 NAT16Q8N8M0 369 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 C12orf29Q8N999 325 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 KAT5Q92993 513 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 WBP2Q969T9 261 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 CYFIP2Q96F07 1278 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 TMEM176AQ96HP8 235 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 ZFRQ96KR1 1074 aaKnown RBP16.48■□□□□ 0.23
NCLN-203ENST00000587740 C8orf48Q96LL4 319 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 HEXIM2Q96MH2 286 aaKnown RBP16.48■□□□□ 0.23
NCLN-203ENST00000587740 DNAAF2Q9NVR5 837 aaKnown RBP16.48■□□□□ 0.23
NCLN-203ENST00000587740 BPTFQ12830 3046 aa16.48■□□□□ 0.23
NCLN-203ENST00000587740 A0A1W2PQF6 199 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 TBC1D3BA6NDS4 549 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 LGALS16A8MUM7 142 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.47■□□□□ 0.23
NCLN-203ENST00000587740 CLDN5O00501 218 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 TRIM66O15016 1216 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 SH3BP5O60239 455 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 TULP3O75386 442 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 MBL2P11226 248 aaPredicted RBP16.47■□□□□ 0.23
NCLN-203ENST00000587740 ANXA13P27216 316 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 WASP42768 502 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 RAD23BP54727 409 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 UBXN1Q04323 297 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 KCNMA1Q12791 1236 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 GJB7Q6PEY0 223 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 TMEM270Q6UE05 265 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 UBR7Q8N806 425 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 ZNF513Q8N8E2 541 aaPredicted RBP16.47■□□□□ 0.23
NCLN-203ENST00000587740 SLC4A11Q8NBS3 891 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 JAKMIP2Q96AA8 810 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 KREMEN1Q96MU8 473 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 FAM49BQ9NUQ9 324 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 TBC1D14Q9P2M4 693 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 KNL1Q8NG31 2342 aa16.47■□□□□ 0.23
NCLN-203ENST00000587740 E2F8A0AVK6 867 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 COCHO43405 550 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 CCDC130P13994 396 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 ACO1P21399 889 aaKnown RBP16.46■□□□□ 0.23
NCLN-203ENST00000587740 RDXP35241 583 aaKnown RBP16.46■□□□□ 0.23
NCLN-203ENST00000587740 ZNF445P59923 1031 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 GAD2Q05329 585 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 IFRD2Q12894 506 aaPredicted RBP16.46■□□□□ 0.23
NCLN-203ENST00000587740 ARHGAP44Q17R89 818 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 SLC36A4Q6YBV0 504 aa16.46■□□□□ 0.23
NCLN-203ENST00000587740 APTXQ7Z2E3 356 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms