RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 MSANTD3Q96H12 275 aa6.83□□□□□ -1.32
NPC1-206ENST00000587223 PIWIL1Q96J94 861 aaKnown RBP6.83□□□□□ -1.32
NPC1-206ENST00000587223 SERPINB11Q96P15 392 aa6.83□□□□□ -1.32
NPC1-206ENST00000587223 C11orf70Q9BRQ4 267 aa6.83□□□□□ -1.32
NPC1-206ENST00000587223 LRFN3Q9BTN0 628 aa6.83□□□□□ -1.32
NPC1-206ENST00000587223 C11orf16Q9NQ32 467 aa6.83□□□□□ -1.32
NPC1-206ENST00000587223 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.83□□□□□ -1.32
NPC1-206ENST00000587223 SLC12A6Q9UHW9 1150 aa6.83□□□□□ -1.32
NPC1-206ENST00000587223 STAP1Q9ULZ2 295 aa6.83□□□□□ -1.32
NPC1-206ENST00000587223 NDRG2Q9UN36 371 aaKnown RBP6.83□□□□□ -1.32
NPC1-206ENST00000587223 SIT1Q9Y3P8 196 aa6.83□□□□□ -1.32
NPC1-206ENST00000587223 MYOFQ9NZM1 2061 aa6.83□□□□□ -1.32
NPC1-206ENST00000587223 A0A0C4DFX4 3053 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 SYNJ2BP-COX16A0A087WUM0 186 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 AKR1B15C9JRZ8 316 aaPredicted RBP6.82□□□□□ -1.32
NPC1-206ENST00000587223 M0QYT0 321 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 DDX3XO00571 662 aaKnown RBP eCLIP6.82□□□□□ -1.324e-16■■■□□ 15.5
NPC1-206ENST00000587223 GREM1O60565 184 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 RTN2O75298 545 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 DAB1O75553 588 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 F9P00740 461 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 FTLP02792 175 aaPredicted RBP6.82□□□□□ -1.32
NPC1-206ENST00000587223 CYBBP04839 570 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 CYP17A1P05093 508 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 ADH5P11766 374 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 KRT3P12035 628 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 GZMAP12544 262 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 AVPR2P30518 371 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 CTHP32929 405 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 SCNN1AP37088 669 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 MATKP42679 507 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 SLC11A2P49281 568 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 GALK1P51570 392 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 ZNF75DP51815 510 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 CENPCQ03188 943 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 RING1Q06587 406 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 NME3Q13232 169 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 LY6G5CQ5SRR4 150 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 E4F1Q66K89 784 aaPredicted RBP6.82□□□□□ -1.32
NPC1-206ENST00000587223 NUGGCQ68CJ6 796 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 HGSNATQ68CP4 663 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 Q6ZNB5 142 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 TPGS1Q6ZTW0 290 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 SND1Q7KZF4 910 aaKnown RBP eCLIP6.82□□□□□ -1.32
NPC1-206ENST00000587223 TMEM25Q86YD3 366 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 DRC7Q8IY82 874 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 MCOLN2Q8IZK6 566 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 NAT16Q8N8M0 369 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 AZIN2Q96A70 460 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 VCPIP1Q96JH7 1222 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 SLC2A13Q96QE2 648 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 P2RY13Q9BPV8 354 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 DDX50Q9BQ39 737 aaKnown RBP6.82□□□□□ -1.32
NPC1-206ENST00000587223 SYT11Q9BT88 431 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 DDX23Q9BUQ8 820 aaKnown RBP6.82□□□□□ -1.32
NPC1-206ENST00000587223 SELENOOQ9BVL4 669 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 BBS2Q9BXC9 721 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 OSBPL6Q9BZF3 934 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 FOXQ1Q9C009 403 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 FAM204AQ9H8W3 233 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 LMAN1LQ9HAT1 526 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 LTB4R2Q9NPC1 389 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 SPHK2Q9NRA0 654 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.82□□□□□ -1.32
NPC1-206ENST00000587223 DDIT4Q9NX09 232 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 RRN3Q9NYV6 651 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 COX16Q9P0S2 106 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 ADAMTS1Q9UHI8 967 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 AGO1Q9UL18 857 aaKnown RBP6.82□□□□□ -1.32
NPC1-206ENST00000587223 TLR6Q9Y2C9 796 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 BDP1A6H8Y1 2624 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 CUL9Q8IWT3 2517 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 HELZP42694 1942 aaKnown RBP6.82□□□□□ -1.32
NPC1-206ENST00000587223 TICRRQ7Z2Z1 1910 aa6.82□□□□□ -1.32
NPC1-206ENST00000587223 ANKRD62A6NC57 917 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 SIGLEC16A6NMB1 481 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 NEDD8-MDP1E9PL57 170 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 TRDMT1O14717 391 aaKnown RBP6.81□□□□□ -1.32
NPC1-206ENST00000587223 IRAK2O43187 625 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 PI15O43692 258 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 ACSL4O60488 711 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 LATS1O95835 1130 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 MOCS2O96007 188 aaPredicted RBP6.81□□□□□ -1.32
NPC1-206ENST00000587223 APOEP02649 317 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 DCNP07585 359 aaKnown RBP6.81□□□□□ -1.32
NPC1-206ENST00000587223 PLEKP08567 350 aaPredicted RBP6.81□□□□□ -1.32
NPC1-206ENST00000587223 SLC2A3P11169 496 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 PDGFRAP16234 1089 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 AOC1P19801 751 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 ABCB4P21439 1286 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 RRM1P23921 792 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 TARSP26639 723 aaKnown RBP6.81□□□□□ -1.32
NPC1-206ENST00000587223 HNRNPH3P31942 346 aaKnown RBP6.81□□□□□ -1.32
NPC1-206ENST00000587223 CCR1P32246 355 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 EIF4A3P38919 411 aaKnown RBP6.81□□□□□ -1.32
NPC1-206ENST00000587223 SLC6A11P48066 632 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 SULT1E1P49888 294 aa6.81□□□□□ -1.32
NPC1-206ENST00000587223 ADKP55263 362 aaKnown RBP6.81□□□□□ -1.32
NPC1-206ENST00000587223 PITX1P78337 314 aaPredicted RBP6.81□□□□□ -1.32
NPC1-206ENST00000587223 DEUP1Q05D60 604 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms