RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 CENPFP49454 3210 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 C2orf16Q68DN1 1984 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 CCDC85CA6NKD9 419 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 SLC38A8A6NNN8 435 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 H7C0C1 242 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 PDE2AO00408 941 aaPredicted RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 FGF10O15520 208 aaPredicted RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 IRAK2O43187 625 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 RAD51CO43502 376 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 CREB3O43889 395 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 NEBLO76041 1014 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 FGF19O95750 216 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 GLUD1P00367 558 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 RB1P06400 928 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 SRGAP2BP0DMP2 458 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 CTSAP10619 480 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 IGFBP6P24592 240 aaPredicted RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 KLRC2P26717 231 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 TNFRSF8P28908 595 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 COILP38432 576 aaPredicted RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 CDKN2BP42772 138 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 ATP5OP48047 213 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 NR2C2P49116 596 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 CDR1P51861 262 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 CACNA2D1P54289 1103 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 HDAC4P56524 1084 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 CAV1Q03135 178 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 CAMK2BQ13554 666 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 SNX1Q13596 522 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 MTMR3Q13615 1198 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 DPYSL3Q14195 570 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 TAF5Q15542 800 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 RAB30Q15771 203 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 CYP1B1Q16678 543 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 PABPC1LQ4VXU2 614 aaKnown RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 ANKRD20A8PQ5CZ79 823 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 C10orf120Q5SQS8 335 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 NUGGCQ68CJ6 796 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 PDE12Q6L8Q7 609 aaKnown RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 AADACL2Q6P093 401 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 EMBQ6PCB8 327 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 LRRC31Q6UY01 552 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 C4orf22Q6V702 233 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 BBS12Q6ZW61 710 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 TMCO2Q7Z6W1 182 aaPredicted RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 PCGF5Q86SE9 256 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 JAMLQ86YT9 394 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 UNC45BQ8IWX7 931 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 RNF168Q8IYW5 571 aaPredicted RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 EIF1ADQ8N9N8 165 aaKnown RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 ATAD1Q8NBU5 361 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 ATL2Q8NHH9 583 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 MICAL1Q8TDZ2 1067 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 BCL7CQ8WUZ0 217 aaPredicted RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 IFT81Q8WYA0 676 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 CENPIQ92674 756 aaPredicted RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 CLP1Q92989 425 aaKnown RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 ACSF2Q96CM8 615 aaPredicted RBP6.42□□□□□ -1.38
LIG3-206ENST00000586058 LRRC45Q96CN5 670 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 SNF8Q96H20 258 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 TCF25Q9BQ70 676 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 PARD6BQ9BYG5 372 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 DCLK3Q9C098 648 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 LRRC19Q9H756 370 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 CATSPERBQ9H7T0 1116 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 ANKZF1Q9H8Y5 726 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 EPB41L5Q9HCM4 733 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 TRPM5Q9NZQ8 1165 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 AMACRQ9UHK6 382 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 MSRAQ9UJ68 235 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 FZD10Q9ULW2 581 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 NAALADL1Q9UQQ1 740 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 TLR6Q9Y2C9 796 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 SLC27A5Q9Y2P5 690 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 YIPF1Q9Y548 306 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 ASB3Q9Y575 518 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 RAD54BQ9Y620 910 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 USP3Q9Y6I4 520 aa6.42□□□□□ -1.38
LIG3-206ENST00000586058 A0A1W2PQH9 124 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 GOLGA6CA6NDK9 693 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 GOLGA6BA6NDN3 693 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 SMAPO00193 183 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 TNFRSF10BO14763 440 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 NCAM2O15394 837 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 TTI1O43156 1089 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 XYLBO75191 536 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 ENDOD1O94919 500 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 MOCS2O96007 188 aaPredicted RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 ITGAVP06756 1048 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 GOLGA6DP0CG33 693 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 RARGP13631 454 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 KRT10P13645 584 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 TCF4P15884 667 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 RPL17P18621 184 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 MX2P20592 715 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 IL1R2P27930 398 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 CDC25CP30307 473 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 ATP5C1P36542 298 aaKnown RBP6.41□□□□□ -1.38
LIG3-206ENST00000586058 BMPR1AP36894 532 aa6.41□□□□□ -1.38
LIG3-206ENST00000586058 HARS2P49590 506 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms