RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 E7ENQ6 273 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 DAB1O75553 588 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 ZBED1O96006 694 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 FYNP06241 537 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 GPD1P21695 349 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 FSHRP23945 695 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 PSMA2P25787 234 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 NHLH1Q02575 133 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 ODF2Q5BJF6 829 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 ACBD5Q5T8D3 534 aaPredicted RBP13.17□□□□□ -0.3
VMP1-202ENST00000585847 CYP4A22Q5TCH4 519 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 OR6B2Q6IFH4 312 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 FAM183BPQ6ZVS7 135 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 STRADAQ7RTN6 431 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 CREG2Q8IUH2 290 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 NPAS3Q8IXF0 933 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 LEMD2Q8NC56 503 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 TEKT4Q8WW24 435 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 OVCA2Q8WZ82 227 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 UBXN4Q92575 508 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 ZSWIM3Q96MP5 696 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 SLC22A12Q96S37 553 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 SLC46A2Q9BY10 475 aa13.17□□□□□ -0.3
VMP1-202ENST00000585847 FRMD8P1Q9BZ68 369 aaPredicted RBP13.17□□□□□ -0.3
VMP1-202ENST00000585847 UXTQ9UBK9 157 aaPredicted RBP13.17□□□□□ -0.3
VMP1-202ENST00000585847 C2orf78A6NCI8 922 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 C19orf67A6NJJ6 358 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 DDX3YO15523 660 aaKnown RBP13.16□□□□□ -0.3
VMP1-202ENST00000585847 OLFM2O95897 454 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 F9P00740 461 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 OAS1P00973 400 aaKnown RBP13.16□□□□□ -0.3
VMP1-202ENST00000585847 CDC25CP30307 473 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 MATKP42679 507 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 PSEN1P49768 467 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 PEX5P50542 639 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 YWHAZP63104 245 aaKnown RBP13.16□□□□□ -0.3
VMP1-202ENST00000585847 TAF5Q15542 800 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 BOLA3Q53S33 107 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 TXNDC8Q6A555 127 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 GET4Q7L5D6 327 aaPredicted RBP13.16□□□□□ -0.3
VMP1-202ENST00000585847 MAP7D3Q8IWC1 876 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 SCUBE3Q8IX30 993 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 RCOR2Q8IZ40 523 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 FGF13Q92913 245 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 NECTIN4Q96NY8 510 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 CDK5RAP1Q96SZ6 601 aaKnown RBP13.16□□□□□ -0.3
VMP1-202ENST00000585847 RNF38Q9H0F5 515 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 ATXN3LQ9H3M9 355 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 POPDC2Q9HBU9 364 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 METTL5Q9NRN9 209 aaKnown RBP13.16□□□□□ -0.3
VMP1-202ENST00000585847 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.16□□□□□ -0.3
VMP1-202ENST00000585847 MRPS23Q9Y3D9 190 aaKnown RBP13.16□□□□□ -0.3
VMP1-202ENST00000585847 MYO10Q9HD67 2058 aa13.16□□□□□ -0.3
VMP1-202ENST00000585847 KIF26AQ9ULI4 1882 aaPredicted RBP13.15□□□□□ -0.3
VMP1-202ENST00000585847 TARSL2A2RTX5 802 aaKnown RBP13.15□□□□□ -0.3
VMP1-202ENST00000585847 C2CD4DB7Z1M9 353 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 GOLGA8SH3BPF8 625 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 ZNF197O14709 1029 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 ZRANB2O95218 330 aaKnown RBP eCLIP13.15□□□□□ -0.3
VMP1-202ENST00000585847 PDGFRAP16234 1089 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 NOS2P35228 1153 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 RFC1P35251 1148 aaPredicted RBP13.15□□□□□ -0.3
VMP1-202ENST00000585847 ZXDBP98169 803 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 TAF12Q16514 161 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 SLC25A52Q3SY17 297 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 GPR158Q5T848 1215 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 TRNP1Q6NT89 227 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 PHLDB2Q86SQ0 1253 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 MON1AQ86VX9 555 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 PDZD8Q8NEN9 1154 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 RIN3Q8TB24 985 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 PGAP3Q96FM1 320 aaPredicted RBP13.15□□□□□ -0.3
VMP1-202ENST00000585847 SLITRK1Q96PX8 696 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 SLC2A13Q96QE2 648 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 DDX23Q9BUQ8 820 aaKnown RBP13.15□□□□□ -0.3
VMP1-202ENST00000585847 PHF7Q9BWX1 381 aaPredicted RBP13.15□□□□□ -0.3
VMP1-202ENST00000585847 CARD6Q9BX69 1037 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 SLITRK6Q9H5Y7 841 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 CCSER2Q9H7U1 834 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.15□□□□□ -0.3
VMP1-202ENST00000585847 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.15□□□□□ -0.3
VMP1-202ENST00000585847 TRPM5Q9NZQ8 1165 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 RCOR3Q9P2K3 495 aaPredicted RBP13.15□□□□□ -0.3
VMP1-202ENST00000585847 FEZ2Q9UHY8 353 aaPredicted RBP13.15□□□□□ -0.3
VMP1-202ENST00000585847 MUTYHQ9UIF7 546 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 NUDT5Q9UKK9 219 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 CDH7Q9ULB5 785 aa13.15□□□□□ -0.3
VMP1-202ENST00000585847 DYNC1I1O14576 645 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 MDM4O15151 490 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 PRPSAP2O60256 369 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 GJB6O95452 261 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 FGF19O95750 216 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 TBX18O95935 607 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 RARGP13631 454 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 FCARP24071 287 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 PPP3CCP48454 512 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 YWHAGP61981 247 aaKnown RBP eCLIP13.14□□□□□ -0.31
VMP1-202ENST00000585847 RPL7AP62424 266 aaKnown RBP13.14□□□□□ -0.31
VMP1-202ENST00000585847 PDK2Q15119 407 aa13.14□□□□□ -0.31
VMP1-202ENST00000585847 BSPRYQ5W0U4 402 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms