RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CDO1Q16878 200 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 SMTNL2Q2TAL5 461 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 DCAF6Q58WW2 860 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 KCNT1Q5JUK3 1230 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 SH3PXD2AQ5TCZ1 1133 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 LRIG3Q6UXM1 1119 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 C4orf22Q6V702 233 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 CYP4V2Q6ZWL3 525 aaPredicted RBP10.8□□□□□ -0.68
LIG3-203ENST00000585370 BNIPLQ7Z465 357 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 ADGRD2Q7Z7M1 963 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 PCGF5Q86SE9 256 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 CROCCP2Q86T23 111 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 LRRTM3Q86VH5 581 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 DDX42Q86XP3 938 aaKnown RBP eCLIP10.8□□□□□ -0.68
LIG3-203ENST00000585370 IQCKQ8N0W5 287 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 LRRC43Q8N309 656 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 ALLCQ8N6M5 410 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 ZMIZ2Q8NF64 920 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 CLEC4CQ8WTT0 213 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 FAF2Q96CS3 445 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 MSLNLQ96KJ4 702 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 C8orf48Q96LL4 319 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 CEP295NLQ96MC4 621 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 PEBP4Q96S96 227 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 RUFY1Q96T51 708 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 HERPUD2Q9BSE4 406 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 CALN1Q9BXU9 219 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 ULBP1Q9BZM6 244 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 PCDH18Q9HCL0 1135 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 ZDHHC18Q9NUE0 388 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.8□□□□□ -0.68
LIG3-203ENST00000585370 KLHL11Q9NVR0 708 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 CLEC1BQ9P126 229 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 ASIC3Q9UHC3 531 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 PRG3Q9Y2Y8 225 aaPredicted RBP10.8□□□□□ -0.68
LIG3-203ENST00000585370 NEU2Q9Y3R4 380 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 PCDHB5Q9Y5E4 795 aa10.8□□□□□ -0.68
LIG3-203ENST00000585370 KIAA1671Q9BY89 1806 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 TBKBP1A7MCY6 615 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 APOL1O14791 398 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 MCF2LO15068 1137 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 PPFIA2O75334 1257 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 KRT14P02533 472 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 GALTP07902 379 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 FAM153BP0C7A2 387 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 L1CAMP32004 1257 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 ARL4AP40617 200 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 RPL21P46778 160 aaKnown RBP10.79□□□□□ -0.68
LIG3-203ENST00000585370 ALDH7A1P49419 539 aaKnown RBP10.79□□□□□ -0.68
LIG3-203ENST00000585370 NDUFV1P49821 464 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 PLTPP55058 493 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 DEUP1Q05D60 604 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 XRCC4Q13426 336 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 SMAD4Q13485 552 aaKnown RBP10.79□□□□□ -0.68
LIG3-203ENST00000585370 LLGL1Q15334 1064 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 TRADDQ15628 312 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 OASLQ15646 514 aaKnown RBP10.79□□□□□ -0.68
LIG3-203ENST00000585370 ARL13BQ3SXY8 428 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 FAM153CQ494X1 144 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 CTXN3Q4LDR2 81 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 ANKRD20A8PQ5CZ79 823 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
LIG3-203ENST00000585370 FAM171A1Q5VUB5 890 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 ANKS3Q6ZW76 656 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 ANKS1BQ7Z6G8 1248 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 RBM23Q86U06 439 aaKnown RBP10.79□□□□□ -0.68
LIG3-203ENST00000585370 GSPT2Q8IYD1 628 aaKnown RBP10.79□□□□□ -0.68
LIG3-203ENST00000585370 ARHGAP18Q8N392 663 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 EFHBQ8N7U6 833 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 OR10T2Q8NGX3 314 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 ACTL9Q8TC94 416 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 HASPINQ8TF76 798 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 ATG4AQ8WYN0 398 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 P3H4Q92791 437 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 NTAN1Q96AB6 310 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 HAUS1Q96CS2 278 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 KCNK16Q96T55 309 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 SNRNP25Q9BV90 132 aaKnown RBP10.79□□□□□ -0.68
LIG3-203ENST00000585370 TRIM31Q9BZY9 425 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 FBXO44Q9H4M3 255 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 PLEKHA4Q9H4M7 779 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 GRHL1Q9NZI5 618 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 HCSTQ9UBK5 93 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 DNAJB4Q9UDY4 337 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 FAM153AQ9UHL3 310 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 CD207Q9UJ71 328 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 ANAPC5Q9UJX4 755 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 DNPEPQ9ULA0 475 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 FZD10Q9ULW2 581 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 USP34Q70CQ2 3546 aa10.79□□□□□ -0.68
LIG3-203ENST00000585370 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 GOLGA8KD6RF30 607 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 H3BRJ5 948 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 M0QYT0 321 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 B4GALT3O60512 393 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 USP17L7P0C7H9 530 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 RARGP13631 454 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 IVDP26440 423 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 KLRC2P26717 231 aa10.78□□□□□ -0.68
LIG3-203ENST00000585370 GRIK1P39086 918 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms