RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 AMY2BP19961 511 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 BDNFP23560 247 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 AKT1P31749 480 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 PIK3CBP42338 1070 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 RGS3P49796 1198 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 ARF3P61204 181 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 NOMO3P69849 1222 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 MRPS5P82675 430 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 ARF1P84077 181 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 FOXL1Q12952 345 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 HABP2Q14520 560 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 PPP2R5BQ15173 497 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 LRRC55Q6ZSA7 311 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 ADGRG3Q86Y34 549 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 ARHGEF19Q8IW93 802 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 HOXB13Q92826 284 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 USP13Q92995 863 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 C3orf49Q96BT1 292 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 KIF1BPQ96EK5 621 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 APIPQ96GX9 242 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 BOD1Q96IK1 185 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF512Q96ME7 567 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 TTC14Q96N46 770 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 RMDN3Q96TC7 470 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 MPHOSPH8Q99549 860 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 VRK1Q99986 396 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 PYM1Q9BRP8 204 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 EIF2AQ9BY44 585 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 INO80BQ9C086 356 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 BHMT2Q9H2M3 363 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 DHX36Q9H2U1 1008 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 RWDD1Q9H446 243 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 VPS45Q9NRW7 570 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 LANCL2Q9NS86 450 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 KIF17Q9P2E2 1029 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 DNAI1Q9UI46 699 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 MAGEL2Q9UJ55 1249 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 CDC42EP3Q9UKI2 254 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 LRRFIP2Q9Y608 721 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 OTOFQ9HC10 1997 aa2.12□□□□□ -2.07
SMCHD1-211ENST00000584897 PABPN1LA6NDY0 278 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 J3KRW8 73 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 HNRNPDLO14979 420 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PIP5K1BO14986 540 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 ENTPD3O75355 529 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF888P0CJ79 500 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 HOXA7P31268 230 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 RPS8P62241 208 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PIGFQ07326 219 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 GOLGA8FQ08AF8 430 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PRPF4BQ13523 1007 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 CCDC142Q17RM4 750 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 RILPL1Q5EBL4 403 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 RRAGBQ5VZM2 374 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 LDHAL6AQ6ZMR3 332 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 COPS6Q7L5N1 327 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 FTSJ3Q8IY81 847 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 GPR156Q8NFN8 814 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 RUFY2Q8WXA3 655 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 LPIN2Q92539 896 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 RSC1A1Q92681 617 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 GRAMD1AQ96CP6 724 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 MOGAT1Q96PD6 335 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 UNKQ9C0B0 810 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 GLT8D2Q9H1C3 349 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 GBA2Q9HCG7 927 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 GPRC5DQ9NZD1 345 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 NRBP1Q9UHY1 535 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 TRMT112Q9UI30 125 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 MAFFQ9ULX9 164 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 RRP7AQ9Y3A4 280 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 CDY2AQ9Y6F7 541 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 ZNF804BA4D1E1 1349 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 A0A1B0GUL6 1792 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 A0A087WV62 115 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 FAM90A27PA6NNH2 459 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 ACOT7O00154 380 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 NCK2O43639 380 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PEX1O43933 1283 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 HNRNPCL1O60812 293 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 HMOX1P09601 288 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 MTHFD1P11586 935 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 MYCLP12524 364 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 SP100P23497 879 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 CRHR1P34998 444 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 MATR3P43243 847 aaKnown RBP eCLIP2.11□□□□□ -2.073e-7■■■■□ 22.9
SMCHD1-211ENST00000584897 ALDH9A1P49189 494 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 ARFIP2P53365 341 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 POLE2P56282 527 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 CCDC184Q52MB2 194 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 CCDC158Q5M9N0 1113 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PXDC1Q5TGL8 231 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 CACHD1Q5VU97 1274 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 LRCH2Q5VUJ6 765 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 NAA35Q5VZE5 725 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 PRR5LQ6MZQ0 368 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 Q7L0L9 218 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 ANKRD44Q8N8A2 993 aa2.11□□□□□ -2.07
SMCHD1-211ENST00000584897 CUL5Q93034 780 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms