RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 GKAP1Q5VSY0 366 aaPredicted RBP10.36□□□□□ -0.75
MKS1-212ENST00000583577 DUPD1Q68J44 220 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 PACS2Q86VP3 889 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 RNF168Q8IYW5 571 aaPredicted RBP10.36□□□□□ -0.75
MKS1-212ENST00000583577 SLCO2A1Q92959 643 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 TLCD1Q96CP7 247 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 UROC1Q96N76 676 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 PPP1R10Q96QC0 940 aaKnown RBP10.36□□□□□ -0.75
MKS1-212ENST00000583577 ERP44Q9BS26 406 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 COLEC11Q9BWP8 271 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 TXLNGYQ9BZA5 131 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 CXCL16Q9H2A7 254 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 PABPC3Q9H361 631 aaKnown RBP10.36□□□□□ -0.75
MKS1-212ENST00000583577 KDM4CQ9H3R0 1056 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 ASB7Q9H672 318 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 KIAA1586Q9HCI6 787 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.36□□□□□ -0.75
MKS1-212ENST00000583577 HSPBP1Q9NZL4 362 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 FNIP2Q9P278 1114 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 FAM153AQ9UHL3 310 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 ADAMTS9Q9P2N4 1935 aa10.36□□□□□ -0.75
MKS1-212ENST00000583577 CASTOR2A6NHX0 329 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 H0YHG0 523 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 DDX3YO15523 660 aaKnown RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 PHF2O75151 1096 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 C1RP00736 705 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 PLA2G2AP14555 144 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 GDI1P31150 447 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 FNTAP49354 379 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 GUCY2FP51841 1108 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 GTF2A1P52655 376 aaPredicted RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 MYL7Q01449 175 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 DR1Q01658 176 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 CREB5Q02930 508 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 ARID5AQ03989 594 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 BFSP1Q12934 665 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 ITIH4Q14624 930 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 SURF1Q15526 300 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 CYP1B1Q16678 543 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 USP41Q3LFD5 358 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 PRSS55Q6UWB4 352 aaPredicted RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 CRELD2Q6UXH1 353 aaPredicted RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 CCDC121Q6ZUS5 278 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 TAOK1Q7L7X3 1001 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 BRSK2Q8IWQ3 736 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 CACNA2D3Q8IZS8 1091 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 ANKS4BQ8N8V4 417 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 XXYLT1Q8NBI6 393 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 BEST2Q8NFU1 509 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 SLC35G2Q8TBE7 412 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 IRF7Q92985 503 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 ELSPBP1Q96BH3 223 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 DDX27Q96GQ7 796 aaKnown RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 ZMAT2Q96NC0 199 aaKnown RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 TRMT61BQ9BVS5 477 aaKnown RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 PACSIN1Q9BY11 444 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 NSRP1Q9H0G5 558 aaKnown RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 ZNF334Q9HCZ1 680 aaPredicted RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 TMEM9BQ9NQ34 198 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 CHST7Q9NS84 486 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 HOMER3Q9NSC5 361 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 IGSF5Q9NSI5 407 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 RBAKQ9NYW8 714 aaPredicted RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 EHD2Q9NZN4 543 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 UVRAGQ9P2Y5 699 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 DNMT3BQ9UBC3 853 aaKnown RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 FBXW11Q9UKB1 542 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 DNAJC12Q9UKB3 198 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 UBQLN1Q9UMX0 589 aaKnown RBP10.35□□□□□ -0.75
MKS1-212ENST00000583577 DERAQ9Y315 318 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 COL6A6A6NMZ7 2263 aa10.35□□□□□ -0.75
MKS1-212ENST00000583577 SPAARA0A1B0GVQ0 90 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 LNP1A1A4G5 178 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 E7EVH7 732 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 CHUKO15111 745 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 EXOC3O60645 756 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 RTN2O75298 545 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 TADA2AO75478 443 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 EFEMP2O95967 443 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 CAPNS1P04632 268 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 ADRB2P07550 413 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 CTNNA2P26232 953 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 GTF2H1P32780 548 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 SCAPQ12770 1279 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 DRAP1Q14919 205 aaPredicted RBP10.34□□□□□ -0.75
MKS1-212ENST00000583577 TMEM132DQ14C87 1099 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 ODF2Q5BJF6 829 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 SEL1L2Q5TEA6 688 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 JADE1Q6IE81 842 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 POTEHQ6S545 545 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 TRMT10CQ7L0Y3 403 aaKnown RBP10.34□□□□□ -0.75
MKS1-212ENST00000583577 ENOSF1Q7L5Y1 443 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 NT5DC4Q86YG4 428 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 RDH13Q8NBN7 331 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 ZSWIM2Q8NEG5 633 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 UBLCP1Q8WVY7 318 aaPredicted RBP10.34□□□□□ -0.75
MKS1-212ENST00000583577 CYFIP2Q96F07 1278 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 TRIM11Q96F44 468 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 AGPAT1Q99943 283 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 GPR62Q9BZJ7 368 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms