RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 GATA5Q9BWX5 397 aaPredicted RBP4.19□□□□□ -1.74
VAPA-206ENST00000583475 TM2D2Q9BX73 214 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 NUAK2Q9H093 628 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 VPS16Q9H269 839 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 CERS4Q9HA82 394 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 NECTIN3Q9NQS3 549 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 FSCN3Q9NQT6 498 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 TM7SF3Q9NS93 570 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 TUBA8Q9NY65 449 aaPredicted RBP4.19□□□□□ -1.74
VAPA-206ENST00000583475 MAFFQ9ULX9 164 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 PCDHGB2Q9Y5G2 931 aa4.19□□□□□ -1.74
VAPA-206ENST00000583475 HEMK1Q9Y5R4 338 aaPredicted RBP4.19□□□□□ -1.74
VAPA-206ENST00000583475 CCDC187A0A096LP49 1063 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 PODXLO00592 558 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 PRYO14603 147 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 PPEF2O14830 753 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 CTIFO43310 598 aaKnown RBP4.18□□□□□ -1.74
VAPA-206ENST00000583475 NTSR2O95665 410 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 SRGAP2BP0DMP2 458 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 ALADP13716 330 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 MMP8P22894 467 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 THBS4P35443 961 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 HOXD12P35452 270 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 IDUAP35475 653 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 IGHMBP2P38935 993 aaKnown RBP4.18□□□□□ -1.74
VAPA-206ENST00000583475 KPNB1Q14974 876 aaKnown RBP4.18□□□□□ -1.74
VAPA-206ENST00000583475 FAM110CQ1W6H9 321 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 EARS2Q5JPH6 523 aaKnown RBP4.18□□□□□ -1.74
VAPA-206ENST00000583475 DGKKQ5KSL6 1271 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 KYAT3Q6YP21 454 aaKnown RBP4.18□□□□□ -1.74
VAPA-206ENST00000583475 FAM186BQ8IYM0 893 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 PRSS3P2Q8NHM4 247 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 DEPTORQ8TB45 409 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 C18orf8Q96DM3 657 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 TNIP3Q96KP6 325 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 CA14Q9ULX7 337 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 CEP83Q9Y592 693 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 ZNF521Q96K83 1311 aa4.18□□□□□ -1.74
VAPA-206ENST00000583475 J3KTA2 159 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 ADAM10O14672 748 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 TLR2O60603 784 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 TAF5LO75529 589 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 ABCB4P21439 1286 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 TACR3P29371 465 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 GSTM5P46439 218 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 ZNF84P51523 738 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 ZNF91Q05481 1191 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 RABEP1Q15276 862 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 ELF2Q15723 593 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 CNGA3Q16281 694 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 C10orf25Q5T742 122 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 MSANTD2Q6P1R3 559 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 FBXO38Q6PIJ6 1188 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 DEF8Q6ZN54 512 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 RASGRP3Q8IV61 690 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 SVIPQ8NHG7 77 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 C16orf52Q8NHV5 167 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 WIPF2Q8TF74 440 aaPredicted RBP4.17□□□□□ -1.74
VAPA-206ENST00000583475 ZNF48Q96MX3 618 aaPredicted RBP4.17□□□□□ -1.74
VAPA-206ENST00000583475 STK33Q9BYT3 514 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 TMEM184CQ9NVA4 438 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 ELOVL5Q9NYP7 299 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 IGSF9Q9P2J2 1179 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 SLC39A10Q9ULF5 831 aa4.17□□□□□ -1.74
VAPA-206ENST00000583475 SIRT4Q9Y6E7 314 aaPredicted RBP4.17□□□□□ -1.74
VAPA-206ENST00000583475 PNMA6EA0A0J9YXQ4 647 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 NPC1O15118 1278 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 PLAUP00749 431 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 FGBP02675 491 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 CTSAP10619 480 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 MATN1P21941 496 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 PTGER1P34995 402 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 NR4A2P43354 598 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 AGTR2P50052 363 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 KRTAP10-11P60412 298 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 HSF1Q00613 529 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 ARL6IP4Q66PJ3 421 aaKnown RBP4.16□□□□□ -1.74
VAPA-206ENST00000583475 ANO7Q6IWH7 933 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 C16orf89Q6UX73 402 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 OR52L2PQ8NGH6 319 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 PIGOQ8TEQ8 1089 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 GLMPQ8WWB7 406 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 AKAP1Q92667 903 aaKnown RBP eCLIP4.16□□□□□ -1.74
VAPA-206ENST00000583475 CELF1Q92879 486 aaKnown RBP4.16□□□□□ -1.74
VAPA-206ENST00000583475 GJA10Q969M2 543 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 FCRL5Q96RD9 977 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 ELAC2Q9BQ52 826 aaKnown RBP4.16□□□□□ -1.74
VAPA-206ENST00000583475 PAAF1Q9BRP4 392 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 RNF26Q9BY78 433 aaPredicted RBP4.16□□□□□ -1.74
VAPA-206ENST00000583475 PCGF6Q9BYE7 350 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 EPS8L2Q9H6S3 715 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 HELLSQ9NRZ9 838 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 ARL8BQ9NVJ2 186 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 ASNSD1Q9NWL6 643 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 TRNAU1APQ9NX07 287 aaKnown RBP4.16□□□□□ -1.74
VAPA-206ENST00000583475 MTMR4Q9NYA4 1195 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 PI4KBQ9UBF8 816 aa4.16□□□□□ -1.74
VAPA-206ENST00000583475 TTC34A8MYJ7 566 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 PCDH17O14917 1159 aa4.15□□□□□ -1.75
VAPA-206ENST00000583475 INPPL1O15357 1258 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms