RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ANKRD22Q5VYY1 191 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 GLB1LQ6UWU2 654 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 UBE2Q1Q7Z7E8 422 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 URGCPQ8TCY9 931 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 MYLPFQ96A32 169 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 FERMT1Q9BQL6 677 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 ADAM33Q9BZ11 813 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 FETUBQ9UGM5 382 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 FAM171BQ6P995 826 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 RSPH1Q8WYR4 309 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 NDRG1Q92597 394 aaKnown RBP23.47■■□□□ 1.35
CCDC47-204ENST00000582252 SUSD3Q96L08 255 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 CCT8L2Q96SF2 557 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 ZMYND15Q9H091 742 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 PNPLA8Q9NP80 782 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 SLC24A2Q9UI40 661 aa23.47■■□□□ 1.35
CCDC47-204ENST00000582252 SF3B1O75533 1304 aaKnown RBP eCLIP23.46■■□□□ 1.35
CCDC47-204ENST00000582252 KIAA0355O15063 1070 aa23.46■■□□□ 1.35
CCDC47-204ENST00000582252 LTFP02788 710 aa23.46■■□□□ 1.35
CCDC47-204ENST00000582252 KCNJ11Q14654 390 aa23.46■■□□□ 1.35
CCDC47-204ENST00000582252 FASTKD3Q14CZ7 662 aaKnown RBP23.46■■□□□ 1.35
CCDC47-204ENST00000582252 RASA2Q15283 850 aa23.46■■□□□ 1.35
CCDC47-204ENST00000582252 TADA2BQ86TJ2 420 aa23.46■■□□□ 1.35
CCDC47-204ENST00000582252 SCML4Q8N228 414 aa23.46■■□□□ 1.35
CCDC47-204ENST00000582252 ZNF473Q8WTR7 871 aaKnown RBP23.46■■□□□ 1.35
CCDC47-204ENST00000582252 NTAN1Q96AB6 310 aa23.46■■□□□ 1.35
CCDC47-204ENST00000582252 QKIQ96PU8 341 aaKnown RBP eCLIP23.46■■□□□ 1.351e-9■■■■■ 189.5
CCDC47-204ENST00000582252 FAM107BQ9H098 131 aa23.46■■□□□ 1.35
CCDC47-204ENST00000582252 NAALADL1Q9UQQ1 740 aa23.46■■□□□ 1.35
CCDC47-204ENST00000582252 TMEM63AO94886 807 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 F9P00740 461 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 BRCC3P46736 316 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 CBLBQ13191 982 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 KLHL38Q2WGJ6 581 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 OVOS1Q6IE37 1185 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 MICALCLQ6ZW33 695 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 PALM2Q8IXS6 379 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 ZMIZ2Q8NF64 920 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 MDM1Q8TC05 714 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 PGAP3Q96FM1 320 aaPredicted RBP23.45■■□□□ 1.34
CCDC47-204ENST00000582252 ELAC1Q9H777 363 aaKnown RBP23.45■■□□□ 1.34
CCDC47-204ENST00000582252 DMAP1Q9NPF5 467 aaPredicted RBP23.45■■□□□ 1.34
CCDC47-204ENST00000582252 RAB6BQ9NRW1 208 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 SENP1Q9P0U3 644 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 ZMYND8Q9ULU4 1186 aaPredicted RBP23.45■■□□□ 1.34
CCDC47-204ENST00000582252 USP3Q9Y6I4 520 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 ENPP3O14638 875 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 SPAG6O75602 509 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 TIMP1P01033 207 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 GOT1P17174 413 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 ZNF135P52742 658 aaPredicted RBP23.45■■□□□ 1.34
CCDC47-204ENST00000582252 NME3Q13232 169 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 ARL13BQ3SXY8 428 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 FNBP1LQ5T0N5 605 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 OTUD1Q5VV17 481 aaPredicted RBP23.45■■□□□ 1.34
CCDC47-204ENST00000582252 NCBP2-AS2Q69YL0 99 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 HEATR6Q6AI08 1181 aaKnown RBP23.45■■□□□ 1.34
CCDC47-204ENST00000582252 CCDC13Q8IYE1 715 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 SLC7A14Q8TBB6 771 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 RNF139Q8WU17 664 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 RTP3Q9BQQ7 232 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 RABEP2Q9H5N1 569 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 PRDM5Q9NQX1 630 aaPredicted RBP23.45■■□□□ 1.34
CCDC47-204ENST00000582252 TMEM161AQ9NX61 479 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 KANSL3Q9P2N6 904 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 PCDHB8Q9UN66 801 aa23.45■■□□□ 1.34
CCDC47-204ENST00000582252 LTBP2Q14767 1821 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 HHLA1C9JL84 531 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 I3L4J1 428 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 NRP1O14786 923 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 GCATO75600 419 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 SEC24CP53992 1094 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 BBS9Q3SYG4 887 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 CCDC38Q502W7 563 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 PAN2Q504Q3 1202 aaKnown RBP23.44■■□□□ 1.34
CCDC47-204ENST00000582252 FOXR1Q6PIV2 292 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 DEFB128Q7Z7B8 93 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 ANKMY2Q8IV38 441 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 FBXO36Q8NEA4 188 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 KCNK16Q96T55 309 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 CCDC134Q9H6E4 229 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 ETNK2Q9NVF9 386 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 EURLQ9NYK6 297 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 CTNNAL1Q9UBT7 734 aa23.44■■□□□ 1.34
CCDC47-204ENST00000582252 SYNJ2BP-COX16A0A087WUM0 186 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 YJEFN3A6XGL0 299 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 E7ENQ6 273 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 STK10O94804 968 aaKnown RBP23.43■■□□□ 1.34
CCDC47-204ENST00000582252 USP17L7P0C7H9 530 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 NCAM1P13591 858 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 AMPD1P23109 780 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 MAGEA6P43360 314 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 GBE1Q04446 702 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 SCAPQ12770 1279 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 TMED2Q15363 201 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 SYPL2Q5VXT5 272 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 CD300LGQ6UXG3 332 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 C4orf50Q6ZRC1 276 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 HFE2Q6ZVN8 426 aa23.43■■□□□ 1.34
CCDC47-204ENST00000582252 PDZD4Q76G19 769 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms