RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	DENND1C	Q8IV53	801 aa		13.14	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	CCDC33	Q8N5R6	958 aa		13.14	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	OLIG1	Q8TAK6	271 aa		13.14	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	ENOX1	Q8TC92	643 aa	Known RBP	13.14	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	UCMA	Q8WVF2	138 aa		13.14	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	GABRG3	Q99928	467 aa		13.14	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	LHX5	Q9H2C1	402 aa		13.14	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	TMEM51	Q9NW97	253 aa		13.14	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	DLL3	Q9NYJ7	618 aa		13.14	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	PCDHGC3	Q9UN70	934 aa		13.14	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	MYO18A	Q92614	2054 aa	Known RBP	13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	THAP12	O43422	761 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	ADAM23	O75077	832 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	MBD3	O95983	291 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	GLI1	P08151	1106 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	RGS7	P49802	495 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	SRSF5	Q13243	272 aa	Known RBP	13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	MTA1	Q13330	715 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	PLK5	Q496M5	336 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	EMC10	Q5UCC4	262 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	ANO7	Q6IWH7	933 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	TMEM92	Q6UXU6	159 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	SFTPA1	Q8IWL2	248 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	MDGA1	Q8NFP4	955 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	EDEM1	Q92611	657 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	SERPINB11	Q96P15	392 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	NOX5	Q96PH1	765 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	DDX50	Q9BQ39	737 aa	Known RBP	13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	SEMA4G	Q9NTN9	838 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	USP18	Q9UMW8	372 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	DAAM1	Q9Y4D1	1078 aa		13.13	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	EML5	Q05BV3	1969 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	BECN2	A8MW95	431 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	KCNJ18	B7U540	433 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	HMBS	P08397	361 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	ZNF806	P0C7X5	589 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	NCAM1	P13591	858 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	P2RY2	P41231	377 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	DPP6	P42658	865 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	SPEM2	Q0P670	501 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	KCNJ12	Q14500	433 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	LPAL2	Q16609	132 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	ARHGAP44	Q17R89	818 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	TCP11X2	Q5H9J9	407 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	MIIP	Q5JXC2	388 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	DENND1B	Q6P3S1	775 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	ANKS1B	Q7Z6G8	1248 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	KBTBD6	Q86V97	674 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	SCUBE3	Q8IX30	993 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	DDI1	Q8WTU0	396 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	NDRG1	Q92597	394 aa	Known RBP	13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	TMA16	Q96EY4	203 aa	Known RBP	13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	SPACA7	Q96KW9	195 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	PARD6A	Q9NPB6	346 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	SIX2	Q9NPC8	291 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	ST7	Q9NRC1	585 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	VPS45	Q9NRW7	570 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	ASNSD1	Q9NWL6	643 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	SFMBT1	Q9UHJ3	866 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	TLR6	Q9Y2C9	796 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	NFE2L3	Q9Y4A8	694 aa		13.12	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	PLXND1	Q9Y4D7	1925 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	PRRT4	C9JH25	899 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	ZNF217	O75362	1048 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	TPM2	P07951	284 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	HOXB2	P14652	356 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	KRT9	P35527	623 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	USP8	P40818	1118 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	TBX4	P57082	545 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	YWHAZ	P63104	245 aa	Known RBP	13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	PDCL	Q13371	301 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	ENPP2	Q13822	863 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	EFHC1	Q5JVL4	640 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	PLA2G2C	Q5R387	149 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	RNF43	Q68DV7	783 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	GJB7	Q6PEY0	223 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	SASS6	Q6UVJ0	657 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	PRR23C	Q6ZRP0	262 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	FAM71A	Q8IYT1	594 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	CHPF	Q8IZ52	775 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	NETO1	Q8TDF5	533 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	WFIKKN2	Q8TEU8	576 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	FAM149B1	Q96BN6	582 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	RMDN1	Q96DB5	314 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	PIWIL1	Q96J94	861 aa	Known RBP	13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	MIS12	Q9H081	205 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	POPDC2	Q9HBU9	364 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	PLCB1	Q9NQ66	1216 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	ANO10	Q9NW15	660 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	DNAJC12	Q9UKB3	198 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	CDV3	Q9UKY7	258 aa	Known RBP	13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	HCN2	Q9UL51	889 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	CEP83	Q9Y592	693 aa		13.11	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	RALGAPA1	Q6GYQ0	2036 aa		13.1	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708		A0A1W2PQF6	199 aa		13.1	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708	TYW5	A2RUC4	315 aa	Known RBP	13.1	□□□□□ -0.31
CDK5RAP3-222	ENST00000581708		E5RJQ4	531 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms