RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 DENND1BQ6P3S1 775 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 KLHDC10Q6PID8 442 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 TRIM65Q6PJ69 517 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 KIAA2013Q8IYS2 634 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 KIAA1958Q8N8K9 716 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 USP33Q8TEY7 942 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 BHMTQ93088 406 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 IPO9Q96P70 1041 aaKnown RBP10.17□□□□□ -0.78
TOP3A-211ENST00000581536 HHIPQ96QV1 700 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 FAM126AQ9BYI3 521 aaPredicted RBP10.17□□□□□ -0.78
TOP3A-211ENST00000581536 MIS12Q9H081 205 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 LRRC4Q9HBW1 653 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 SIX2Q9NPC8 291 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 CLIC5Q9NZA1 410 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 HESX1Q9UBX0 185 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.17□□□□□ -0.78
TOP3A-211ENST00000581536 SLC8A2Q9UPR5 921 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 CNTN6Q9UQ52 1028 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 INVSQ9Y283 1065 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 NUP205Q92621 2012 aa10.17□□□□□ -0.78
TOP3A-211ENST00000581536 OTOGLQ3ZCN5 2332 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 SPTBN4Q9H254 2564 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 M0QYV0 167 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 ATG13O75143 517 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 TULP3O75386 442 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 LETM1O95202 739 aaPredicted RBP10.16□□□□□ -0.78
TOP3A-211ENST00000581536 ADH1CP00326 375 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 CISD3P0C7P0 127 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 TYRP14679 529 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 USP8P40818 1118 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 GPD2P43304 727 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 SLC8A3P57103 927 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 DAOAP59103 153 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 KCNMA1Q12791 1236 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 SIM2Q14190 667 aaPredicted RBP10.16□□□□□ -0.78
TOP3A-211ENST00000581536 DMC1Q14565 340 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 FBXO43Q4G163 708 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 C4orf48Q5BLP8 95 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 MIIPQ5JXC2 388 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 BTBD8Q5XKL5 378 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 GBP6Q6ZN66 633 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 Q6ZNB5 142 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 PRR23BQ6ZRT6 265 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 TOGARAM2Q6ZUX3 1019 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 SYT13Q7L8C5 426 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 WDR5BQ86VZ2 330 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 LONP2Q86WA8 852 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 DENND1CQ8IV53 801 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 ETFBKMTQ8IXQ9 262 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 WDTC1Q8N5D0 677 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 ALLCQ8N6M5 410 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 ZNF606Q8WXB4 792 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 KCTD13Q8WZ19 329 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 OTUB2Q96DC9 234 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 ERLEC1Q96DZ1 483 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 HINFPQ9BQA5 517 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 ARHGAP9Q9BRR9 750 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 EPC1Q9H2F5 836 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 THAP9Q9H5L6 903 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 ARHGEF4Q9NR80 690 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 MARCH2Q9P0N8 246 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 CYTH4Q9UIA0 394 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 AGO1Q9UL18 857 aaKnown RBP10.16□□□□□ -0.78
TOP3A-211ENST00000581536 CLEC4EQ9ULY5 219 aa10.16□□□□□ -0.78
TOP3A-211ENST00000581536 GPR179Q6PRD1 2367 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 FAM170AA1A519 330 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 TBC1D3BA6NDS4 549 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 NEDD8-MDP1E9PL57 170 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 SGK1O00141 431 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 FOXN3O00409 490 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-211ENST00000581536 DCLK1O15075 740 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 HOXC11O43248 304 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-211ENST00000581536 KLF8O95600 359 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-211ENST00000581536 APODP05090 189 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 FYNP06241 537 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 PNMA6AP0CW24 399 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-211ENST00000581536 SETSIPP0DME0 302 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 TGM1P22735 817 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 ERCC5P28715 1186 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-211ENST00000581536 CORO1AP31146 461 aaKnown RBP10.15□□□□□ -0.78
TOP3A-211ENST00000581536 WASP42768 502 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 TNFRSF4P43489 277 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 KIR2DL1P43626 348 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-211ENST00000581536 MFAP3P55082 362 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 COG7P83436 770 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 EXOC3L4Q17RC7 722 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 VWA3BQ502W6 1294 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 RSRC2Q7L4I2 434 aaKnown RBP10.15□□□□□ -0.78
TOP3A-211ENST00000581536 FMNL3Q8IVF7 1028 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 IL17RCQ8NAC3 791 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 TXNDC5Q8NBS9 432 aaKnown RBP10.15□□□□□ -0.78
TOP3A-211ENST00000581536 RUBCNQ92622 972 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 EXOC4Q96A65 974 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 TUBGCP2Q9BSJ2 902 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 BBS2Q9BXC9 721 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 TJP2Q9UDY2 1190 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 LSM7Q9UK45 103 aaKnown RBP10.15□□□□□ -0.78
TOP3A-211ENST00000581536 DNAJC12Q9UKB3 198 aa10.15□□□□□ -0.78
TOP3A-211ENST00000581536 SMG5Q9UPR3 1016 aaKnown RBP10.15□□□□□ -0.78
TOP3A-211ENST00000581536 GOLGA6L7A0A1B0GV03 622 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms