RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 LIMS2Q7Z4I7 341 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 TOP6BLQ8N6T0 577 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 RBBP8NLQ8NC74 664 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 CLEC18CQ8NCF0 446 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 WASF1Q92558 559 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 PCED1BQ96HM7 432 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 C8orf48Q96LL4 319 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 XPO6Q96QU8 1125 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 ELF4Q99607 663 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 BBS2Q9BXC9 721 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 DPH1Q9BZG8 443 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 ASCL3Q9NQ33 180 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 STARD5Q9NSY2 213 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 GDAP2Q9NXN4 497 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 KCNG1Q9UIX4 513 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 SNX9Q9Y5X1 595 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 CYP46A1Q9Y6A2 500 aa8.14□□□□□ -1.11
SMARCE1-217ENST00000580654 LAD1O00515 517 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 VILLO15195 856 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 DFNA5O60443 496 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 FSBPO95073 299 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 MT-CO3P00414 261 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 IGHV4-34P06331 123 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 ITGAVP06756 1048 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 PLCG1P19174 1290 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 ANXA13P27216 316 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 PCSK1P29120 753 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 EPHA8P29322 1005 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 RPIAP49247 311 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 ZNF132P52740 706 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 SLC12A3P55017 1021 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 SKOR1P84550 965 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 CYP27A1Q02318 531 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 IFRD2Q12894 506 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 BNIP3Q12983 259 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 ORC2Q13416 577 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 GEN1Q17RS7 908 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 C4orf17Q53FE4 359 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 SFMBT2Q5VUG0 894 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 SNX30Q5VWJ9 437 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 TDRD10Q5VZ19 366 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 HIST2H2BCQ6DN03 193 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 HTR3DQ70Z44 454 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 SYT2Q8N9I0 419 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 ZSWIM2Q8NEG5 633 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 SLC6A18Q96N87 628 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 SLITRK1Q96PX8 696 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 FIZ1Q96SL8 496 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 EBF2Q9HAK2 575 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 PLK2Q9NYY3 685 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 EHD2Q9NZN4 543 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 CHORDC1Q9UHD1 332 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 SIX4Q9UIU6 781 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 CDH9Q9ULB4 789 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 STYXL1Q9Y6J8 313 aa8.13□□□□□ -1.11
SMARCE1-217ENST00000580654 PTPRJQ12913 1337 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 LRBAP50851 2863 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 A0A1W2PNU3 283 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 H0YCG3 227 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 K7ENM7 598 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 WNT9AO14904 365 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 EFSO43281 561 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 SEMA4FO95754 770 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 ZDHHC11BP0C7U3 371 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 ACADMP11310 421 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 SNRPBP14678 240 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 CKMT2P17540 419 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 ABCB4P21439 1286 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 ACP1P24666 158 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 MFAP3P55082 362 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 ERVPABLB-1P60509 514 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 GABREP78334 506 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 POU5F1Q01860 360 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 ST3GAL1Q11201 340 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 ZNF234Q14588 700 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 TTC38Q5R3I4 469 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 HECTD3Q5T447 861 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 CDCP2Q5VXM1 449 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 ADALQ6DHV7 355 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 ADAT2Q7Z6V5 191 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 NT5DC4Q86YG4 428 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 LRRC52Q8N7C0 313 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 NECAB1Q8N987 351 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 NSUN7Q8NE18 718 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 MYCBPAPQ8TBZ2 947 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 SORCS1Q8WY21 1168 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 BHMTQ93088 406 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 VCPIP1Q96JH7 1222 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 PSMG3-AS1Q96PY0 264 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 KLF16Q9BXK1 252 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 TM6SF1Q9BZW5 370 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 NPDC1Q9NQX5 325 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 PDRG1Q9NUG6 133 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 LARSQ9P2J5 1176 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 WDR35Q9P2L0 1181 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 ADAMTS1Q9UHI8 967 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 AGO2Q9UKV8 859 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 SLC27A6Q9Y2P4 619 aa8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 TLN1Q9Y490 2541 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-217ENST00000580654 SPTBN1Q01082 2364 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms